EnhancerDB
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  3. vista51929[chr6:41674655-41674829]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51929[chr6:41674655-41674829]
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Tissue distribution of vista51929
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Transcription factor that possibly regulate vista51929[chr6:41674655-41674829]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540185
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540186
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540187
chr6 41674714 41674724 SP1 JASPAR yes 70363176
chr6 41674714 41674724 SP1 JASPAR yes 101667273
chr6 41674714 41674735 ZNF263 JASPAR yes 70363177
chr6 41674714 41674735 ZNF263 JASPAR yes 101667274
chr6 41674722 41674736 SPIC JASPAR yes 70363178
chr6 41674722 41674736 SPIC JASPAR yes 101667275
chr6 41674728 41674733 ETS2 TRANSFAC yes 70363179
chr6 41674728 41674733 ETS2 TRANSFAC yes 101667276
chr6 41674736 41674751 LEF1 JASPAR yes 70363180
chr6 41674736 41674751 LEF1 JASPAR yes 101667277
chr6 41674737 41674751 TCF7L2 JASPAR yes 70363181
chr6 41674737 41674751 TCF7L2 JASPAR yes 101667278
chr6 41674739 41674750 CEBPB JASPAR yes 70363182
chr6 41674739 41674750 CEBPB JASPAR yes 101667279
chr6 41674739 41674752 ATF4 JASPAR yes 70363183
chr6 41674739 41674752 ATF4 JASPAR yes 101667280
chr6 41674740 41674753 JUN JASPAR yes 70363184
chr6 41674740 41674753 JUN JASPAR yes 101667281
chr6 41674740 41674761 ZNF263 JASPAR yes 70363185
chr6 41674740 41674761 ZNF263 JASPAR yes 101667282
chr6 41674743 41674764 ZNF263 JASPAR yes 70363186
chr6 41674743 41674764 ZNF263 JASPAR yes 101667283
chr6 41674763 41674783 ESR1 JASPAR yes 70363187
chr6 41674763 41674783 ESR1 JASPAR yes 101667284
chr6 41674779 41674800 ZNF263 JASPAR yes 70363188
chr6 41674779 41674800 ZNF263 JASPAR yes 101667285
chr6 41674791 41674799 SP1 TRANSFAC yes 70363189
chr6 41674791 41674799 SP1 TRANSFAC yes 101667286
chr6 41674791 41674806 TFAP2A JASPAR yes 70363190
chr6 41674791 41674806 TFAP2A JASPAR yes 101667287
chr6 41674794 41674806 TFAP2A JASPAR yes 70363191
chr6 41674794 41674806 TFAP2B JASPAR yes 70363192
chr6 41674794 41674806 TFAP2C JASPAR yes 70363193
chr6 41674794 41674806 TFAP2A JASPAR yes 101667288
chr6 41674794 41674806 TFAP2B JASPAR yes 101667289
chr6 41674794 41674806 TFAP2C JASPAR yes 101667290
chr6 41674794 41674809 TFAP2A JASPAR yes 70363194
chr6 41674794 41674809 TFAP2A JASPAR yes 101667291
SNP sites on vista51929[chr6:41674655-41674829]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 41674675 rs545044745 C T
POLR2A
9027247
chr6 41674766 rs530345704 A T
ESR1 POLR2A
9027248
Genes possibly regulated by vista51929[chr6:41674655-41674829]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41604620 41621984 + MDFI ENSG00000112559.9 41604620 0.86 1.0 6570 29965
chr6 41651716 41703997 - TFEB ENSG00000112561.13 41703997 0.8 0.99 6571 70832
chr6 41653964 41654127 + AL035588.1 ENSG00000268275.1 41653964 0.0 1.0 6572 79309
chr6 41704449 41721847 - PGC ENSG00000096088.12 41721847 1.0 1.0 6573 52982
chr6 41737914 41754280 - FRS3 ENSG00000137218.6 41754280 0.71 1.0 6574 20549
chr6 41748087 41757879 + PRICKLE4 ENSG00000124593.10 41748087 0.76 1.0 6575 26742
chr6 41755400 41757636 + TOMM6 ENSG00000214736.3 41755400 0.89 0.88 6576 19429
Expression level of Genes
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miRNAs possibly regulated by vista51929[chr6:41674655-41674829]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results