EnhancerDB
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  3. vista51934[chr6:41889955-41890338]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51934[chr6:41889955-41890338]
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Tissue distribution of vista51934
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Transcription factor that possibly regulate vista51934[chr6:41889955-41890338]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41889959 41889966 POU2F1 TRANSFAC yes 70363408
chr6 41889980 41889993 POU3F3 JASPAR yes 70363409
chr6 41889981 41889985 YY1 TRANSFAC yes 70363410
chr6 41889981 41889991 NFATC3 JASPAR yes 70363411
chr6 41889981 41889993 POU2F1 JASPAR yes 70363412
chr6 41889993 41890008 STAT2 JASPAR yes 70363413
chr6 41889994 41890008 STAT1 JASPAR yes 70363414
chr6 41889996 41890015 RFX2 JASPAR yes 70363415
chr6 41890000 41890016 RFX2 JASPAR yes 70363416
chr6 41890000 41890016 RFX3 JASPAR yes 70363417
chr6 41890000 41890016 RFX4 JASPAR yes 70363418
chr6 41890000 41890016 RFX5 JASPAR yes 70363419
chr6 41890001 41890020 RFX2 JASPAR yes 70363420
chr6 41890003 41890018 RFX5 JASPAR yes 70363421
chr6 41890009 41890018 SRY JASPAR yes 70363422
chr6 41890011 41890014 MYB TRANSFAC yes 70363423
chr6 41890011 41890020 SOX9 JASPAR yes 70363424
chr6 41890011 41890027 SOX4 JASPAR yes 70363425
chr6 41890012 41890027 SOX21 JASPAR yes 70363426
chr6 41890012 41890028 SOX4 JASPAR yes 70363427
chr6 41890053 41890067 NR2F1 JASPAR yes 70363428
chr6 41890073 41890091 IRF2 JASPAR yes 70363429
chr6 41890084 41890089 ETS2 TRANSFAC yes 70363430
chr6 41890096 41890111 FOXP1 JASPAR yes 70363431
chr6 41890099 41890110 FOXP2 JASPAR yes 70363432
chr6 41890103 41890109 HiNF-A TRANSFAC yes 70363433
chr6 41890109 41890118 SRY JASPAR yes 70363434
chr6 41890111 41890119 FOXO3 JASPAR yes 70363435
chr6 41890141 41890146 MYB TRANSFAC yes 70363436
chr6 41890145 41890157 PROX1 JASPAR yes 70363437
chr6 41890156 41890167 FOXC1 JASPAR yes 70363438
chr6 41890157 41890168 FOXA1 JASPAR yes 70363439
chr6 41890170 41890176 MAZ TRANSFAC yes 70363440
chr6 41890170 41890181 E2F6 JASPAR yes 70363441
chr6 41890178 41890191 NR2F1 JASPAR yes 70363442
chr6 41890182 41890196 NR2F1 JASPAR yes 70363443
chr6 41890229 41890233 YY1 TRANSFAC yes 70363444
chr6 41890240 41890245 MYB TRANSFAC yes 70363445
chr6 41890266 41890271 GATA2 JASPAR yes 70363446
chr6 41890307 41890321 CREB3L1 JASPAR yes 70363447
chr6 41890326 41890331 GATA2 JASPAR yes 70363448
SNP sites on vista51934[chr6:41889955-41890338]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 41890138 rs567899062 ATGAAT A no 9028486
chr6 41890302 rs569869391 GT G no 9028487
Genes possibly regulated by vista51934[chr6:41889955-41890338]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41757634 41863099 - USP49 ENSG00000164663.9 41863099 0.79 0.99 6577 73144
chr6 41873092 41888877 - MED20 ENSG00000124641.10 41888877 0.72 0.99 6578 98922
chr6 41888926 41900784 + BYSL ENSG00000112578.5 41888926 0.72 1.0 6579 98971
Expression level of Genes
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miRNAs possibly regulated by vista51934[chr6:41889955-41890338]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results