EnhancerDB
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  3. vista51936[chr6:41907242-41907431]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51936[chr6:41907242-41907431]
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Tissue distribution of vista51936
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Transcription factor that possibly regulate vista51936[chr6:41907242-41907431]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41906736 41907746 POLR2A UCSC Txn Factor no Conserved 108540191
chr6 41906736 41907746 POLR2A UCSC Txn Factor no Conserved 108540192
chr6 41907241 41907459 CEBPB UCSC Txn Factor no Conserved 108540193
chr6 41907260 41907503 MAZ UCSC Txn Factor no Conserved 108540194
chr6 41907319 41907485 TEAD4 UCSC Txn Factor no Conserved 108540195
chr6 41907302 41907317 RUNX2 JASPAR yes 70363468
chr6 41907303 41907312 RUNX2 JASPAR yes 70363469
chr6 41907303 41907313 RUNX3 JASPAR yes 70363470
chr6 41907303 41907314 RUNX1 JASPAR yes 70363471
chr6 41907314 41907322 MEIS2 JASPAR yes 70363472
chr6 41907314 41907322 MEIS3 JASPAR yes 70363473
chr6 41907325 41907331 MZF1 JASPAR yes 70363474
chr6 41907334 41907345 CEBPA JASPAR yes 70363475
chr6 41907335 41907346 CEBPB JASPAR yes 70363476
chr6 41907338 41907344 TCF4 TRANSFAC yes 70363477
chr6 41907350 41907354 ESR1 TRANSFAC yes 70363478
chr6 41907357 41907378 ZNF263 JASPAR yes 70363479
chr6 41907358 41907364 SP1 TRANSFAC yes 70363480
chr6 41907359 41907364 SP1 TRANSFAC yes 70363481
chr6 41907360 41907365 SP1 TRANSFAC yes 70363482
chr6 41907366 41907381 NR2C2 JASPAR yes 70363483
chr6 41907368 41907378 SP1 JASPAR yes 70363484
chr6 41907369 41907379 SP1 JASPAR yes 70363485
chr6 41907370 41907376 MAZ TRANSFAC yes 70363486
chr6 41907376 41907380 LFA1 TRANSFAC yes 70363487
chr6 41907382 41907386 YY1 TRANSFAC yes 70363488
chr6 41907391 41907401 ERF JASPAR yes 70363489
chr6 41907393 41907399 ETS1 JASPAR yes 70363490
chr6 41907393 41907399 SPI1 JASPAR yes 70363491
chr6 41907417 41907421 NFE TRANSFAC yes 70363492
chr6 41907417 41907430 SMAD2 JASPAR yes 70363493
chr6 41907421 41907425 NFE TRANSFAC yes 70363494
SNP sites on vista51936[chr6:41907242-41907431]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista51936[chr6:41907242-41907431]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41757634 41863099 - USP49 ENSG00000164663.9 41863099 0.79 0.99 6577 55857
chr6 41873092 41888877 - MED20 ENSG00000124641.10 41888877 0.72 0.99 6578 81635
chr6 41888926 41900784 + BYSL ENSG00000112578.5 41888926 0.72 1.0 6579 81684
Expression level of Genes
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miRNAs possibly regulated by vista51936[chr6:41907242-41907431]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results