EnhancerDB
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  3. vista51941[chr6:41964920-41965094]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51941[chr6:41964920-41965094]
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Tissue distribution of vista51941
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Transcription factor that possibly regulate vista51941[chr6:41964920-41965094]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41964937 41964952 HNF4G JASPAR yes 70363780
chr6 41964937 41964952 HNF4G JASPAR yes 101684652
chr6 41964938 41964953 HNF4A JASPAR yes 70363781
chr6 41964938 41964953 HNF4A JASPAR yes 101684653
chr6 41964943 41964954 ESRRA JASPAR yes 70363782
chr6 41964943 41964954 ESRRA JASPAR yes 101684654
chr6 41964947 41964951 LFA1 TRANSFAC yes 70363783
chr6 41964947 41964951 LFA1 TRANSFAC yes 101684655
chr6 41964955 41964959 YY1 TRANSFAC yes 70363784
chr6 41964955 41964959 YY1 TRANSFAC yes 101684656
chr6 41964964 41964975 NFKB1 JASPAR yes 70363785
chr6 41964964 41964975 NFKB1 JASPAR yes 101684657
chr6 41964965 41964975 REL JASPAR yes 70363786
chr6 41964965 41964975 REL JASPAR yes 101684658
chr6 41964969 41964981 PKNOX1 JASPAR yes 70363787
chr6 41964969 41964981 TGIF1 JASPAR yes 70363788
chr6 41964969 41964981 PKNOX1 JASPAR yes 101684659
chr6 41964969 41964981 TGIF1 JASPAR yes 101684660
chr6 41964973 41964991 RARA JASPAR yes 70363789
chr6 41964973 41964991 RARA JASPAR yes 101684661
chr6 41964989 41964995 LEF1 TRANSFAC yes 70363790
chr6 41964989 41964995 SOX10 JASPAR yes 70363791
chr6 41964989 41964995 LEF1 TRANSFAC yes 101684662
chr6 41964989 41964995 SOX10 JASPAR yes 101684663
chr6 41965004 41965018 RXRB JASPAR yes 70363792
chr6 41965004 41965018 RXRG JASPAR yes 70363793
chr6 41965004 41965018 RXRB JASPAR yes 101684664
chr6 41965004 41965018 RXRG JASPAR yes 101684665
chr6 41965004 41965019 HNF4G JASPAR yes 70363794
chr6 41965004 41965019 NR2C2 JASPAR yes 70363795
chr6 41965004 41965019 HNF4G JASPAR yes 101684666
chr6 41965004 41965019 NR2C2 JASPAR yes 101684667
chr6 41965015 41965019 NFE TRANSFAC yes 70363796
chr6 41965015 41965019 NFE TRANSFAC yes 101684668
chr6 41965036 41965043 SPIB JASPAR yes 70363797
chr6 41965036 41965043 SPIB JASPAR yes 101684669
chr6 41965040 41965052 POU3F2 JASPAR yes 70363798
chr6 41965040 41965052 POU3F2 JASPAR yes 101684670
chr6 41965042 41965056 GATA2 JASPAR yes 70363799
chr6 41965042 41965056 GATA2 JASPAR yes 101684671
chr6 41965055 41965065 HMBOX1 JASPAR yes 70363800
chr6 41965055 41965065 HMBOX1 JASPAR yes 101684672
chr6 41965057 41965060 MYB TRANSFAC yes 70363801
chr6 41965057 41965060 MYB TRANSFAC yes 101684673
chr6 41965062 41965071 HIC2 JASPAR yes 70363802
chr6 41965062 41965071 HIC2 JASPAR yes 101684674
chr6 41965062 41965072 NFIA JASPAR yes 70363803
chr6 41965062 41965072 NFIA JASPAR yes 101684675
chr6 41965063 41965072 NFIX JASPAR yes 70363804
chr6 41965063 41965072 NFIX JASPAR yes 101684676
chr6 41965064 41965070 NFIC JASPAR yes 70363805
chr6 41965064 41965070 NFIC JASPAR yes 101684677
chr6 41965073 41965076 MYB TRANSFAC yes 70363806
chr6 41965073 41965076 MYB TRANSFAC yes 101684678
chr6 41965085 41965099 JUN JASPAR yes 70363807
chr6 41965085 41965099 JUN JASPAR yes 101684679
chr6 41965087 41965098 BATF JASPAR yes 70363808
chr6 41965087 41965098 BATF JASPAR yes 101684680
chr6 41965089 41965100 FOS JASPAR yes 70363809
chr6 41965089 41965100 FOSL1 JASPAR yes 70363810
chr6 41965089 41965100 JUND JASPAR yes 70363811
chr6 41965089 41965100 FOS JASPAR yes 101684681
chr6 41965089 41965100 FOSL1 JASPAR yes 101684682
chr6 41965089 41965100 JUND JASPAR yes 101684683
SNP sites on vista51941[chr6:41964920-41965094]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 41964924 rs9357379 T G no 9028966
chr6 41964954 rs9369321 C A,G
ESRRA
9028967
chr6 41964970 rs9381114 A G
NFKB1 PKNOX1 REL TGIF1
9028968
chr6 41965076 rs6904394 A G
MYB
9028969
Genes possibly regulated by vista51941[chr6:41964920-41965094]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41873092 41888877 - MED20 ENSG00000124641.10 41888877 0.72 0.99 6578 23957
chr6 41888926 41900784 + BYSL ENSG00000112578.5 41888926 0.72 1.0 6579 24006
chr6 41902671 42018095 - CCND3 ENSG00000112576.8 42018095 0.86 0.98 6580 46999
chr6 42018251 42055199 + TAF8 ENSG00000137413.11 42018251 0.74 1.0 6581 46843
Expression level of Genes
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miRNAs possibly regulated by vista51941[chr6:41964920-41965094]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results