EnhancerDB
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  3. vista51942[chr6:41994407-41994555]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51942[chr6:41994407-41994555]
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Tissue distribution of vista51942
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Transcription factor that possibly regulate vista51942[chr6:41994407-41994555]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41994419 41994425 MZF1 JASPAR yes 70363812
chr6 41994419 41994425 MZF1 JASPAR yes 101688288
chr6 41994431 41994435 NFE TRANSFAC yes 70363813
chr6 41994431 41994435 NFE TRANSFAC yes 101688289
chr6 41994432 41994448 T JASPAR yes 70363814
chr6 41994432 41994448 T JASPAR yes 101688290
chr6 41994446 41994456 TFE3 JASPAR yes 70363815
chr6 41994446 41994456 TFEB JASPAR yes 70363816
chr6 41994446 41994456 TFEC JASPAR yes 70363817
chr6 41994446 41994456 TFE3 JASPAR yes 101688291
chr6 41994446 41994456 TFEB JASPAR yes 101688292
chr6 41994446 41994456 TFEC JASPAR yes 101688293
chr6 41994446 41994457 USF1 JASPAR yes 70363818
chr6 41994446 41994457 USF2 JASPAR yes 70363819
chr6 41994446 41994457 USF1 JASPAR yes 101688294
chr6 41994446 41994457 USF2 JASPAR yes 101688295
chr6 41994447 41994457 MAX JASPAR yes 70363820
chr6 41994447 41994457 MAX JASPAR yes 101688296
chr6 41994453 41994465 NHLH1 JASPAR yes 70363821
chr6 41994453 41994465 NHLH1 JASPAR yes 101688297
chr6 41994454 41994464 MSC JASPAR yes 70363822
chr6 41994454 41994464 TFAP4 JASPAR yes 70363823
chr6 41994454 41994464 MSC JASPAR yes 101688298
chr6 41994454 41994464 TFAP4 JASPAR yes 101688299
chr6 41994475 41994487 PKNOX1 JASPAR yes 70363824
chr6 41994475 41994487 PKNOX2 JASPAR yes 70363825
chr6 41994475 41994487 TGIF1 JASPAR yes 70363826
chr6 41994475 41994487 PKNOX1 JASPAR yes 101688300
chr6 41994475 41994487 PKNOX2 JASPAR yes 101688301
chr6 41994475 41994487 TGIF1 JASPAR yes 101688302
chr6 41994489 41994499 RORA JASPAR yes 70363827
chr6 41994489 41994499 RORA JASPAR yes 101688303
chr6 41994491 41994499 CREB1 JASPAR yes 70363828
chr6 41994491 41994499 CREB1 JASPAR yes 101688304
chr6 41994492 41994512 TP53 JASPAR yes 70363829
chr6 41994492 41994512 TP53 JASPAR yes 101688305
chr6 41994494 41994498 ESR1 TRANSFAC yes 70363830
chr6 41994494 41994498 ESR1 TRANSFAC yes 101688306
chr6 41994497 41994515 SRF JASPAR yes 70363831
chr6 41994497 41994515 SRF JASPAR yes 101688307
chr6 41994508 41994513 ETS2 TRANSFAC yes 70363832
chr6 41994508 41994513 ETS2 TRANSFAC yes 101688308
chr6 41994508 41994516 EHF JASPAR yes 70363833
chr6 41994508 41994516 EHF JASPAR yes 101688309
chr6 41994514 41994518 LFA1 TRANSFAC yes 70363834
chr6 41994514 41994518 LFA1 TRANSFAC yes 101688310
chr6 41994527 41994548 ZNF263 JASPAR yes 70363835
chr6 41994527 41994548 ZNF263 JASPAR yes 101688311
chr6 41994534 41994555 ZNF263 JASPAR yes 70363836
chr6 41994534 41994555 ZNF263 JASPAR yes 101688312
chr6 41994542 41994553 E2F6 JASPAR yes 70363837
chr6 41994542 41994553 E2F6 JASPAR yes 101688313
chr6 41994546 41994556 ZNF740 JASPAR yes 70363838
chr6 41994546 41994556 ZNF740 JASPAR yes 101688314
chr6 41994549 41994555 MZF1 JASPAR yes 70363839
chr6 41994549 41994555 MZF1 JASPAR yes 101688315
SNP sites on vista51942[chr6:41994407-41994555]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 41994481 rs115253804 T C
PKNOX1 PKNOX2 TGIF1
9029333
Genes possibly regulated by vista51942[chr6:41994407-41994555]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41902671 42018095 - CCND3 ENSG00000112576.8 42018095 0.86 0.98 6580 76460
chr6 42018251 42055199 + TAF8 ENSG00000137413.11 42018251 0.74 1.0 6581 76304
Expression level of Genes
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miRNAs possibly regulated by vista51942[chr6:41994407-41994555]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results