EnhancerDB
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  3. vista51944[chr6:41996341-41996754]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51944[chr6:41996341-41996754]
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Tissue distribution of vista51944
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Transcription factor that possibly regulate vista51944[chr6:41996341-41996754]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41995915 41996843 POLR2A UCSC Txn Factor no Conserved 108540202
chr6 41995915 41996843 POLR2A UCSC Txn Factor no Conserved 108540203
chr6 41996114 41996458 PHF8 UCSC Txn Factor no Conserved 108540204
chr6 41996114 41996458 PHF8 UCSC Txn Factor no Conserved 108540205
chr6 41996191 41996662 JUND UCSC Txn Factor no Conserved 108540206
chr6 41996191 41996662 JUND UCSC Txn Factor no Conserved 108540207
chr6 41996217 41996767 GATA2 UCSC Txn Factor no Conserved 108540208
chr6 41996217 41996767 GATA2 UCSC Txn Factor no Conserved 108540209
chr6 41996244 41996600 RCOR1 UCSC Txn Factor no Conserved 108540210
chr6 41996244 41996600 RCOR1 UCSC Txn Factor no Conserved 108540211
chr6 41996257 41996727 GATA1 UCSC Txn Factor no Conserved 108540212
chr6 41996257 41996727 GATA1 UCSC Txn Factor no Conserved 108540213
chr6 41996268 41996631 JUN UCSC Txn Factor no Conserved 108540214
chr6 41996268 41996631 JUN UCSC Txn Factor no Conserved 108540215
chr6 41996274 41996674 NR2F2 UCSC Txn Factor no Conserved 108540216
chr6 41996274 41996674 NR2F2 UCSC Txn Factor no Conserved 108540217
chr6 41996295 41996625 EP300 UCSC Txn Factor no Conserved 108540218
chr6 41996295 41996625 EP300 UCSC Txn Factor no Conserved 108540219
chr6 41996299 41996628 MAFK UCSC Txn Factor no Conserved 108540220
chr6 41996299 41996628 MAFK UCSC Txn Factor no Conserved 108540221
chr6 41996335 41996611 MAFF UCSC Txn Factor no Conserved 108540222
chr6 41996335 41996611 MAFF UCSC Txn Factor no Conserved 108540223
chr6 41996351 41996547 ATF3 UCSC Txn Factor no Conserved 108540224
chr6 41996364 41996591 TEAD4 UCSC Txn Factor no Conserved 108540225
chr6 41996383 41996548 NFE2 UCSC Txn Factor no Conserved 108540226
chr6 41996386 41996607 TAL1 UCSC Txn Factor no Conserved 108540227
chr6 41996353 41996357 NFE TRANSFAC yes 70363899
chr6 41996353 41996357 NFE TRANSFAC yes 101688533
chr6 41996421 41996430 NKX3-2 JASPAR yes 70363900
chr6 41996421 41996430 NKX3-2 JASPAR yes 101688534
chr6 41996422 41996430 ISL2 JASPAR yes 70363901
chr6 41996422 41996430 ISL2 JASPAR yes 101688535
chr6 41996428 41996445 ESR1 JASPAR yes 70363902
chr6 41996428 41996445 ESR1 JASPAR yes 101688536
chr6 41996429 41996444 ESR2 JASPAR yes 70363903
chr6 41996429 41996444 ESR2 JASPAR yes 101688537
chr6 41996433 41996448 JUND JASPAR yes 70363904
chr6 41996433 41996448 JUND JASPAR yes 101688538
chr6 41996435 41996449 BATF3 JASPAR yes 70363905
chr6 41996435 41996449 BATF3 JASPAR yes 101688539
chr6 41996436 41996451 JUND JASPAR yes 70363906
chr6 41996436 41996451 JUND JASPAR yes 101688540
chr6 41996437 41996450 JUN JASPAR yes 70363907
chr6 41996437 41996450 JUN JASPAR yes 101688541
chr6 41996438 41996446 CREB1 JASPAR yes 70363908
chr6 41996438 41996446 CREB1 JASPAR yes 101688542
chr6 41996449 41996470 MAFG JASPAR yes 70363909
chr6 41996449 41996470 MAFG JASPAR yes 101688543
chr6 41996450 41996464 JUN JASPAR yes 70363910
chr6 41996450 41996464 JUN JASPAR yes 101688544
chr6 41996452 41996463 BATF JASPAR yes 70363911
chr6 41996452 41996463 BATF JASPAR yes 101688545
chr6 41996453 41996464 FOSL2 JASPAR yes 70363912
chr6 41996453 41996464 JUNB JASPAR yes 70363913
chr6 41996453 41996464 FOSL2 JASPAR yes 101688546
chr6 41996453 41996464 JUNB JASPAR yes 101688547
chr6 41996454 41996465 FOS JASPAR yes 70363914
chr6 41996454 41996465 FOSL1 JASPAR yes 70363915
chr6 41996454 41996465 JUND JASPAR yes 70363916
chr6 41996454 41996465 NFE2 JASPAR yes 70363917
chr6 41996454 41996465 FOS JASPAR yes 101688548
chr6 41996454 41996465 FOSL1 JASPAR yes 101688549
chr6 41996454 41996465 JUND JASPAR yes 101688550
chr6 41996454 41996465 NFE2 JASPAR yes 101688551
chr6 41996454 41996472 MAFF JASPAR yes 70363918
chr6 41996454 41996472 MAFF JASPAR yes 101688552
chr6 41996455 41996464 JDP2 JASPAR yes 70363919
chr6 41996455 41996464 JDP2 JASPAR yes 101688553
chr6 41996455 41996466 JUNB JASPAR yes 70363920
chr6 41996455 41996466 NFE2L2 JASPAR yes 70363921
chr6 41996455 41996466 JUNB JASPAR yes 101688554
chr6 41996455 41996466 NFE2L2 JASPAR yes 101688555
chr6 41996455 41996469 JUN JASPAR yes 70363922
chr6 41996455 41996469 JUN JASPAR yes 101688556
chr6 41996456 41996467 BATF JASPAR yes 70363923
chr6 41996456 41996467 BATF JASPAR yes 101688557
chr6 41996464 41996478 PAX6 JASPAR yes 70363924
chr6 41996464 41996478 PAX6 JASPAR yes 101688558
chr6 41996466 41996481 STAT2 JASPAR yes 70363925
chr6 41996466 41996481 STAT2 JASPAR yes 101688559
chr6 41996467 41996481 STAT1 JASPAR yes 70363926
chr6 41996467 41996481 STAT1 JASPAR yes 101688560
chr6 41996468 41996482 IRF7 JASPAR yes 70363927
chr6 41996468 41996482 IRF7 JASPAR yes 101688561
chr6 41996468 41996483 IRF9 JASPAR yes 70363928
chr6 41996468 41996483 IRF9 JASPAR yes 101688562
chr6 41996472 41996487 STAT2 JASPAR yes 70363929
chr6 41996472 41996487 STAT2 JASPAR yes 101688563
chr6 41996473 41996487 STAT1 JASPAR yes 70363930
chr6 41996473 41996487 STAT1 JASPAR yes 101688564
chr6 41996475 41996489 GATA2 JASPAR yes 70363931
chr6 41996475 41996489 GATA2 JASPAR yes 101688565
chr6 41996476 41996492 SRF JASPAR yes 70363932
chr6 41996476 41996492 SRF JASPAR yes 101688566
chr6 41996477 41996482 ETS2 TRANSFAC yes 70363933
chr6 41996477 41996482 ETS2 TRANSFAC yes 101688567
chr6 41996479 41996487 GATA3 JASPAR yes 70363934
chr6 41996479 41996487 GATA5 JASPAR yes 70363935
chr6 41996479 41996487 GATA3 JASPAR yes 101688568
chr6 41996479 41996487 GATA5 JASPAR yes 101688569
chr6 41996496 41996501 GATA2 JASPAR yes 70363936
chr6 41996496 41996501 GATA2 JASPAR yes 101688570
chr6 41996499 41996502 MYB TRANSFAC yes 70363937
chr6 41996499 41996502 MYB TRANSFAC yes 101688571
chr6 41996518 41996523 ETS2 TRANSFAC yes 70363938
chr6 41996538 41996559 REST JASPAR yes 70363939
chr6 41996539 41996558 REST JASPAR yes 70363940
chr6 41996544 41996554 SP1 JASPAR yes 70363941
chr6 41996559 41996572 SMAD2 JASPAR yes 70363942
chr6 41996567 41996583 SOX4 JASPAR yes 70363943
chr6 41996572 41996582 MYF6 JASPAR yes 70363944
chr6 41996602 41996606 YY1 TRANSFAC yes 70363945
chr6 41996607 41996618 ESRRB JASPAR yes 70363946
chr6 41996646 41996650 H4TF2 TRANSFAC yes 70363947
chr6 41996664 41996668 H4TF2 TRANSFAC yes 70363948
chr6 41996682 41996693 NFE2L2 JASPAR yes 70363949
chr6 41996686 41996690 NFE TRANSFAC yes 70363950
chr6 41996703 41996724 IRF1 JASPAR yes 70363951
chr6 41996705 41996720 STAT2 JASPAR yes 70363952
chr6 41996708 41996723 FOXP1 JASPAR yes 70363953
chr6 41996709 41996724 FOXP1 JASPAR yes 70363954
chr6 41996710 41996725 FOXP1 JASPAR yes 70363955
chr6 41996711 41996726 FOXP1 JASPAR yes 70363956
chr6 41996715 41996730 FOXP1 JASPAR yes 70363957
SNP sites on vista51944[chr6:41996341-41996754]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 41996371 rs184230574 T G
ATF3 EP300 GATA1 GATA2 JUN JUND MAFF MAFK NR2F2 PHF8 POLR2A RCOR1 TEAD4
9029383
chr6 41996496 rs190823993 G A
ATF3 EP300 GATA1 GATA2 JUN JUND MAFF MAFK NFE2 NR2F2 POLR2A RCOR1 TAL1 TEAD4
9029384
chr6 41996535 rs139966824 C A,T
ATF3 EP300 GATA1 GATA2 JUN JUND MAFF MAFK NFE2 NR2F2 POLR2A RCOR1 TAL1 TEAD4
9029385
chr6 41996607 rs9381120 T A
EP300 ESRRB GATA1 GATA2 JUN JUND MAFF MAFK NR2F2 POLR2A TAL1
9029386
chr6 41996699 rs80211614 C T
GATA1 GATA2 POLR2A
9029387
chr6 41996703 rs202142727 G T
GATA1 GATA2 IRF1 POLR2A
9029388
chr6 41996707 rs562701505 C T
GATA1 GATA2 IRF1 POLR2A STAT2
9029389
chr6 41996708 rs570342987 G A
FOXP1 GATA1 GATA2 IRF1 POLR2A STAT2
9029390
chr6 41996713 rs201855274 T TTTG
FOXP1 GATA1 GATA2 IRF1 POLR2A STAT2
9029391
chr6 41996725 rs77743540 C T
FOXP1 GATA1 GATA2 POLR2A
9029392
chr6 41996726 rs74861368 C T
FOXP1 GATA1 GATA2 POLR2A
9029393
Genes possibly regulated by vista51944[chr6:41996341-41996754]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41902671 42018095 - CCND3 ENSG00000112576.8 42018095 0.86 0.98 6580 78659
chr6 42018251 42055199 + TAF8 ENSG00000137413.11 42018251 0.74 1.0 6581 78503
Expression level of Genes
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miRNAs possibly regulated by vista51944[chr6:41996341-41996754]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results