EnhancerDB
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  3. vista51948[chr6:42081758-42081907]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51948[chr6:42081758-42081907]
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Tissue distribution of vista51948
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Transcription factor that possibly regulate vista51948[chr6:42081758-42081907]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42081771 42081787 ZNF143 JASPAR yes 70364103
chr6 42081771 42081787 ZNF143 JASPAR yes 101692396
chr6 42081775 42081789 POU4F1 JASPAR yes 70364104
chr6 42081775 42081789 POU4F1 JASPAR yes 101692397
chr6 42081782 42081802 RREB1 JASPAR yes 70364105
chr6 42081782 42081802 RREB1 JASPAR yes 101692398
chr6 42081798 42081804 PEA3 TRANSFAC yes 70364106
chr6 42081798 42081804 PEA3 TRANSFAC yes 101692399
chr6 42081808 42081813 GATA2 JASPAR yes 70364107
chr6 42081808 42081813 GATA2 JASPAR yes 101692400
chr6 42081834 42081845 FOSL1 JASPAR yes 70364108
chr6 42081834 42081845 JUND JASPAR yes 70364109
chr6 42081834 42081845 FOSL1 JASPAR yes 101692401
chr6 42081834 42081845 JUND JASPAR yes 101692402
chr6 42081835 42081846 JUNB JASPAR yes 70364110
chr6 42081835 42081846 JUNB JASPAR yes 101692403
chr6 42081844 42081855 ESRRA JASPAR yes 70364111
chr6 42081844 42081855 ESRRA JASPAR yes 101692404
chr6 42081845 42081860 HNF4A JASPAR yes 70364112
chr6 42081845 42081860 HNF4A JASPAR yes 101692405
chr6 42081846 42081860 RXRB JASPAR yes 70364113
chr6 42081846 42081860 RXRG JASPAR yes 70364114
chr6 42081846 42081860 RXRB JASPAR yes 101692406
chr6 42081846 42081860 RXRG JASPAR yes 101692407
chr6 42081846 42081861 HNF4G JASPAR yes 70364115
chr6 42081846 42081861 LEF1 JASPAR yes 70364116
chr6 42081846 42081861 NR2C2 JASPAR yes 70364117
chr6 42081846 42081861 HNF4G JASPAR yes 101692408
chr6 42081846 42081861 LEF1 JASPAR yes 101692409
chr6 42081846 42081861 NR2C2 JASPAR yes 101692410
chr6 42081847 42081861 TCF7L2 JASPAR yes 70364118
chr6 42081847 42081861 TCF7L2 JASPAR yes 101692411
chr6 42081849 42081856 TCF4 TRANSFAC yes 70364119
chr6 42081849 42081856 TCF4 TRANSFAC yes 101692412
chr6 42081850 42081856 LEF1 TRANSFAC yes 70364120
chr6 42081850 42081856 TCF4 TRANSFAC yes 70364121
chr6 42081850 42081856 LEF1 TRANSFAC yes 101692413
chr6 42081850 42081856 TCF4 TRANSFAC yes 101692414
chr6 42081862 42081871 NKX3-2 JASPAR yes 70364122
chr6 42081862 42081871 NKX3-2 JASPAR yes 101692415
chr6 42081863 42081871 ISL2 JASPAR yes 70364123
chr6 42081863 42081871 ISL2 JASPAR yes 101692416
chr6 42081865 42081880 FOXP1 JASPAR yes 70364124
chr6 42081865 42081880 FOXP1 JASPAR yes 101692417
chr6 42081868 42081879 FOXP2 JASPAR yes 70364125
chr6 42081868 42081879 FOXP2 JASPAR yes 101692418
chr6 42081872 42081878 HiNF-A TRANSFAC yes 70364126
chr6 42081872 42081878 HiNF-A TRANSFAC yes 101692419
chr6 42081877 42081881 YY1 TRANSFAC yes 70364127
chr6 42081877 42081881 YY1 TRANSFAC yes 101692420
chr6 42081889 42081904 RUNX2 JASPAR yes 70364128
chr6 42081889 42081904 RUNX2 JASPAR yes 101692421
chr6 42081898 42081902 LFA1 TRANSFAC yes 70364129
chr6 42081898 42081902 LFA1 TRANSFAC yes 101692422
SNP sites on vista51948[chr6:42081758-42081907]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42081809 rs9462770 G A
GATA2
9029954
chr6 42081844 rs12211359 C A
ESRRA FOSL1 JUNB JUND
9029955
Genes possibly regulated by vista51948[chr6:42081758-42081907]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41902671 42018095 - CCND3 ENSG00000112576.8 42018095 0.86 0.98 6580 36337
chr6 42018251 42055199 + TAF8 ENSG00000137413.11 42018251 0.74 1.0 6581 36493
chr6 42068856 42110357 - C6orf132 ENSG00000188112.4 42110357 0.89 1.0 6582 71550
chr6 42123144 42147794 + GUCA1A ENSG00000048545.9 42123144 0.85 0.99 6583 58763
chr6 42123279 42131156 + RP1-139D8.6 ENSG00000214732.1 42123279 1.0 0.0 6584 58628
chr6 42152139 42162654 - GUCA1B ENSG00000112599.8 42162654 0.77 1.0 6585 19253
Expression level of Genes
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miRNAs possibly regulated by vista51948[chr6:42081758-42081907]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results