EnhancerDB
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  3. vista51949[chr6:42086253-42086632]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51949[chr6:42086253-42086632]
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Tissue distribution of vista51949
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Transcription factor that possibly regulate vista51949[chr6:42086253-42086632]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42086101 42086619 ESR1 UCSC Txn Factor no Conserved 108540233
chr6 42086287 42086305 ESR2 JASPAR yes 70364130
chr6 42086287 42086305 ESR2 JASPAR yes 101693116
chr6 42086288 42086305 ESR1 JASPAR yes 70364131
chr6 42086288 42086305 ESR1 JASPAR yes 101693117
chr6 42086289 42086304 ESR2 JASPAR yes 70364132
chr6 42086289 42086304 ESR2 JASPAR yes 101693118
chr6 42086289 42086309 ESR1 JASPAR yes 70364133
chr6 42086289 42086309 ESR1 JASPAR yes 101693119
chr6 42086290 42086294 LFA1 TRANSFAC yes 70364134
chr6 42086290 42086294 LFA1 TRANSFAC yes 101693120
chr6 42086322 42086334 POU2F1 JASPAR yes 70364135
chr6 42086322 42086334 POU2F1 JASPAR yes 101693121
chr6 42086322 42086336 POU1F1 JASPAR yes 70364136
chr6 42086322 42086336 POU1F1 JASPAR yes 101693122
chr6 42086323 42086336 POU2F2 JASPAR yes 70364137
chr6 42086323 42086336 POU2F2 JASPAR yes 101693123
chr6 42086353 42086358 SP1 TRANSFAC yes 70364138
chr6 42086353 42086358 SP1 TRANSFAC yes 101693124
chr6 42086370 42086389 CTCF JASPAR yes 70364139
chr6 42086370 42086389 CTCF JASPAR yes 101693125
chr6 42086391 42086410 PAX5 JASPAR yes 70364140
chr6 42086391 42086410 PAX5 JASPAR yes 101693126
chr6 42086392 42086406 TLX1 JASPAR yes 70364141
chr6 42086392 42086406 TLX1 JASPAR yes 101693127
chr6 42086393 42086397 LFA1 TRANSFAC yes 70364142
chr6 42086393 42086397 LFA1 TRANSFAC yes 101693128
chr6 42086427 42086442 TFAP2C JASPAR yes 70364143
chr6 42086427 42086442 TFAP2C JASPAR yes 101693129
chr6 42086428 42086439 TFAP2A JASPAR yes 70364144
chr6 42086428 42086439 TFAP2B JASPAR yes 70364145
chr6 42086428 42086439 TFAP2C JASPAR yes 70364146
chr6 42086428 42086439 TFAP2A JASPAR yes 101693130
chr6 42086428 42086439 TFAP2B JASPAR yes 101693131
chr6 42086428 42086439 TFAP2C JASPAR yes 101693132
chr6 42086428 42086440 INSM1 JASPAR yes 70364147
chr6 42086428 42086440 INSM1 JASPAR yes 101693133
chr6 42086429 42086438 TFAP2A JASPAR yes 70364148
chr6 42086429 42086438 TFAP2A JASPAR yes 101693134
chr6 42086431 42086446 HNF4G JASPAR yes 70364149
chr6 42086431 42086446 NR2C2 JASPAR yes 70364150
chr6 42086431 42086446 HNF4G JASPAR yes 101693135
chr6 42086431 42086446 NR2C2 JASPAR yes 101693136
chr6 42086432 42086447 HNF4A JASPAR yes 70364151
chr6 42086432 42086447 HNF4A JASPAR yes 101693137
chr6 42086434 42086438 LFA1 TRANSFAC yes 70364152
chr6 42086434 42086438 LFA1 TRANSFAC yes 101693138
chr6 42086464 42086475 NFKB1 JASPAR yes 70364153
chr6 42086464 42086475 NFKB1 JASPAR yes 101693139
chr6 42086465 42086475 RELA JASPAR yes 70364154
chr6 42086465 42086475 RELA JASPAR yes 101693140
chr6 42086486 42086497 NRL JASPAR yes 70364155
chr6 42086486 42086497 NRL JASPAR yes 101693141
chr6 42086490 42086503 ELF3 JASPAR yes 70364156
chr6 42086490 42086503 ELF3 JASPAR yes 101693142
chr6 42086491 42086501 ETV6 JASPAR yes 70364157
chr6 42086491 42086501 ETV6 JASPAR yes 101693143
chr6 42086491 42086502 ELF5 JASPAR yes 70364158
chr6 42086491 42086502 ELF5 JASPAR yes 101693144
chr6 42086491 42086503 EHF JASPAR yes 70364159
chr6 42086491 42086503 ELF1 JASPAR yes 70364160
chr6 42086491 42086503 ELF4 JASPAR yes 70364161
chr6 42086491 42086503 EHF JASPAR yes 101693145
chr6 42086491 42086503 ELF1 JASPAR yes 101693146
chr6 42086491 42086503 ELF4 JASPAR yes 101693147
chr6 42086491 42086504 ELF1 JASPAR yes 70364162
chr6 42086491 42086504 ELF1 JASPAR yes 101693148
chr6 42086492 42086499 SPI1 JASPAR yes 70364163
chr6 42086492 42086499 SPI1 JASPAR yes 101693149
chr6 42086492 42086500 EHF JASPAR yes 70364164
chr6 42086492 42086500 EHF JASPAR yes 101693150
chr6 42086502 42086513 TBX20 JASPAR yes 70364165
chr6 42086502 42086513 TBX20 JASPAR yes 101693151
chr6 42086504 42086512 MGA JASPAR yes 70364166
chr6 42086504 42086512 TBX15 JASPAR yes 70364167
chr6 42086504 42086512 TBX1 JASPAR yes 70364168
chr6 42086504 42086512 TBX4 JASPAR yes 70364169
chr6 42086504 42086512 TBX5 JASPAR yes 70364170
chr6 42086504 42086512 MGA JASPAR yes 101693152
chr6 42086504 42086512 TBX15 JASPAR yes 101693153
chr6 42086504 42086512 TBX1 JASPAR yes 101693154
chr6 42086504 42086512 TBX4 JASPAR yes 101693155
chr6 42086504 42086512 TBX5 JASPAR yes 101693156
chr6 42086539 42086543 ESR1 TRANSFAC yes 70364171
chr6 42086539 42086543 ESR1 TRANSFAC yes 101693157
chr6 42086586 42086591 MYC TRANSFAC yes 70364172
chr6 42086586 42086591 MYC TRANSFAC yes 101693158
chr6 42086600 42086621 IRF1 JASPAR yes 70364173
chr6 42086600 42086621 IRF1 JASPAR yes 101693159
chr6 42086601 42086622 IRF1 JASPAR yes 70364174
chr6 42086601 42086622 IRF1 JASPAR yes 101693160
chr6 42086603 42086624 IRF1 JASPAR yes 70364175
chr6 42086603 42086624 IRF1 JASPAR yes 101693161
chr6 42086604 42086625 IRF1 JASPAR yes 70364176
chr6 42086604 42086625 IRF1 JASPAR yes 101693162
chr6 42086605 42086620 FOXP1 JASPAR yes 70364177
chr6 42086605 42086620 FOXP1 JASPAR yes 101693163
chr6 42086605 42086626 IRF1 JASPAR yes 70364178
chr6 42086605 42086626 IRF1 JASPAR yes 101693164
chr6 42086606 42086621 FOXP1 JASPAR yes 70364179
chr6 42086606 42086621 FOXP1 JASPAR yes 101693165
chr6 42086606 42086627 IRF1 JASPAR yes 70364180
chr6 42086606 42086627 IRF1 JASPAR yes 101693166
chr6 42086607 42086622 FOXP1 JASPAR yes 70364181
chr6 42086607 42086622 FOXP1 JASPAR yes 101693167
chr6 42086607 42086628 IRF1 JASPAR yes 70364182
chr6 42086607 42086628 IRF1 JASPAR yes 101693168
chr6 42086608 42086623 FOXP1 JASPAR yes 70364183
chr6 42086608 42086623 FOXP1 JASPAR yes 101693169
chr6 42086608 42086629 IRF1 JASPAR yes 70364184
chr6 42086608 42086629 IRF1 JASPAR yes 101693170
chr6 42086609 42086624 FOXP1 JASPAR yes 70364185
chr6 42086609 42086624 FOXP1 JASPAR yes 101693171
chr6 42086609 42086630 IRF1 JASPAR yes 70364186
chr6 42086609 42086630 IRF1 JASPAR yes 101693172
chr6 42086610 42086625 FOXP1 JASPAR yes 70364187
chr6 42086610 42086625 FOXP1 JASPAR yes 101693173
chr6 42086610 42086631 IRF1 JASPAR yes 70364188
chr6 42086610 42086631 IRF1 JASPAR yes 101693174
chr6 42086611 42086626 FOXP1 JASPAR yes 70364189
chr6 42086611 42086626 FOXP1 JASPAR yes 101693175
chr6 42086612 42086627 FOXP1 JASPAR yes 70364190
chr6 42086612 42086627 FOXP1 JASPAR yes 101693176
chr6 42086613 42086628 FOXP1 JASPAR yes 70364191
chr6 42086613 42086628 FOXP1 JASPAR yes 101693177
chr6 42086614 42086629 FOXP1 JASPAR yes 70364192
chr6 42086614 42086629 FOXP1 JASPAR yes 101693178
chr6 42086615 42086630 FOXP1 JASPAR yes 70364193
chr6 42086615 42086630 FOXP1 JASPAR yes 101693179
chr6 42086616 42086631 FOXP1 JASPAR yes 70364194
chr6 42086616 42086631 FOXP1 JASPAR yes 101693180
chr6 42086617 42086632 FOXP1 JASPAR yes 70364195
chr6 42086617 42086632 FOXP1 JASPAR yes 101693181
chr6 42086630 42086644 GATA2 JASPAR yes 70364196
chr6 42086630 42086644 GATA2 JASPAR yes 101693182
chr6 42086632 42086638 GATA3 JASPAR yes 70364197
chr6 42086632 42086638 GATA3 JASPAR yes 101693183
SNP sites on vista51949[chr6:42086253-42086632]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42086286 rs140142222 G A
ESR1
9030007
chr6 42086302 rs9381145 C G,T
ESR1 ESR2
9030008
chr6 42086606 rs546407195 ATT A
ESR1 FOXP1 IRF1
9030009
chr6 42086606 rs796092745 ATT A
ESR1 FOXP1 IRF1
9030010
Genes possibly regulated by vista51949[chr6:42086253-42086632]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41902671 42018095 - CCND3 ENSG00000112576.8 42018095 0.86 0.98 6580 31842
chr6 42018251 42055199 + TAF8 ENSG00000137413.11 42018251 0.74 1.0 6581 31998
chr6 42068856 42110357 - C6orf132 ENSG00000188112.4 42110357 0.89 1.0 6582 76275
chr6 42123144 42147794 + GUCA1A ENSG00000048545.9 42123144 0.85 0.99 6583 63488
chr6 42123279 42131156 + RP1-139D8.6 ENSG00000214732.1 42123279 1.0 0.0 6584 63353
chr6 42152139 42162654 - GUCA1B ENSG00000112599.8 42162654 0.77 1.0 6585 23978
chr6 42174539 42185603 - MRPS10 ENSG00000048544.5 42185603 0.51 0.99 6586 1029
Expression level of Genes
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miRNAs possibly regulated by vista51949[chr6:42086253-42086632]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results