EnhancerDB
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  3. vista51950[chr6:42090479-42090803]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51950[chr6:42090479-42090803]
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Tissue distribution of vista51950
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Transcription factor that possibly regulate vista51950[chr6:42090479-42090803]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42090491 42090767 ESR1 UCSC Txn Factor no Conserved 108540234
chr6 42090469 42090490 ZNF263 JASPAR yes 70364198
chr6 42090469 42090490 ZNF263 JASPAR yes 101693749
chr6 42090476 42090497 ZNF263 JASPAR yes 70364199
chr6 42090476 42090497 ZNF263 JASPAR yes 101693751
chr6 42090531 42090537 MAZ TRANSFAC yes 70364200
chr6 42090531 42090537 MAZ TRANSFAC yes 101693752
chr6 42090543 42090547 LFA1 TRANSFAC yes 70364201
chr6 42090543 42090547 LFA1 TRANSFAC yes 101693753
chr6 42090590 42090610 ESR1 JASPAR yes 70364202
chr6 42090590 42090610 ESR1 JASPAR yes 101693754
chr6 42090594 42090612 ESR1 JASPAR yes 70364203
chr6 42090594 42090612 ESR1 JASPAR yes 101693755
chr6 42090595 42090610 ESR2 JASPAR yes 70364204
chr6 42090595 42090610 ESR2 JASPAR yes 101693756
chr6 42090599 42090603 NFE TRANSFAC yes 70364205
chr6 42090599 42090603 NFE TRANSFAC yes 101693757
chr6 42090600 42090611 BATF JASPAR yes 70364206
chr6 42090600 42090611 BATF JASPAR yes 101693758
chr6 42090601 42090612 JUNB JASPAR yes 70364207
chr6 42090601 42090612 JUNB JASPAR yes 101693759
chr6 42090602 42090613 FOS JASPAR yes 70364208
chr6 42090602 42090613 FOSL1 JASPAR yes 70364209
chr6 42090602 42090613 JUND JASPAR yes 70364210
chr6 42090602 42090613 FOS JASPAR yes 101693760
chr6 42090602 42090613 FOSL1 JASPAR yes 101693761
chr6 42090602 42090613 JUND JASPAR yes 101693762
chr6 42090611 42090628 ESR1 JASPAR yes 70364211
chr6 42090611 42090628 ESR1 JASPAR yes 101693763
chr6 42090611 42090629 ESR1 JASPAR yes 70364212
chr6 42090611 42090629 ESR2 JASPAR yes 70364213
chr6 42090611 42090629 ESR1 JASPAR yes 101693764
chr6 42090611 42090629 ESR2 JASPAR yes 101693765
chr6 42090612 42090627 ESR2 JASPAR yes 70364214
chr6 42090612 42090627 ESR2 JASPAR yes 101693766
chr6 42090612 42090632 ESR1 JASPAR yes 70364215
chr6 42090612 42090632 ESR1 JASPAR yes 101693767
chr6 42090614 42090619 SP1 TRANSFAC yes 70364216
chr6 42090614 42090619 SP1 TRANSFAC yes 101693768
chr6 42090615 42090625 SREBF1 JASPAR yes 70364217
chr6 42090615 42090625 SREBF2 JASPAR yes 70364218
chr6 42090615 42090625 SREBF1 JASPAR yes 101693769
chr6 42090615 42090625 SREBF2 JASPAR yes 101693770
chr6 42090639 42090644 SP1 TRANSFAC yes 70364219
chr6 42090639 42090644 SP1 TRANSFAC yes 101693771
chr6 42090641 42090650 TFAP2A JASPAR yes 70364220
chr6 42090641 42090650 TFAP2A JASPAR yes 101693772
chr6 42090646 42090650 LFA1 TRANSFAC yes 70364221
chr6 42090646 42090650 LFA1 TRANSFAC yes 101693773
chr6 42090649 42090663 EBF1 JASPAR yes 70364222
chr6 42090649 42090663 EBF1 JASPAR yes 101693774
chr6 42090651 42090662 EBF1 JASPAR yes 70364223
chr6 42090651 42090662 EBF1 JASPAR yes 101693775
chr6 42090655 42090660 TFAP2A TRANSFAC yes 70364224
chr6 42090655 42090660 TFAP2A TRANSFAC yes 101693776
chr6 42090655 42090661 MZF1 JASPAR yes 70364225
chr6 42090655 42090661 MZF1 JASPAR yes 101693777
chr6 42090656 42090671 SCRT1 JASPAR yes 70364226
chr6 42090656 42090671 SCRT1 JASPAR yes 101693778
chr6 42090658 42090671 SCRT2 JASPAR yes 70364227
chr6 42090658 42090671 SCRT2 JASPAR yes 101693779
chr6 42090660 42090666 PTF TRANSFAC yes 70364228
chr6 42090660 42090666 PTF TRANSFAC yes 101693780
chr6 42090675 42090685 MZF1 JASPAR yes 70364229
chr6 42090675 42090685 MZF1 JASPAR yes 101693781
chr6 42090697 42090701 YY1 TRANSFAC yes 70364230
chr6 42090697 42090701 YY1 TRANSFAC yes 101693782
chr6 42090698 42090713 HNF1A JASPAR yes 70364231
chr6 42090698 42090713 HNF1A JASPAR yes 101693783
chr6 42090699 42090712 HNF1B JASPAR yes 70364232
chr6 42090699 42090712 HNF1B JASPAR yes 101693784
chr6 42090699 42090713 POU4F1 JASPAR yes 70364233
chr6 42090699 42090713 POU4F1 JASPAR yes 101693785
chr6 42090699 42090715 POU4F2 JASPAR yes 70364234
chr6 42090699 42090715 POU4F3 JASPAR yes 70364235
chr6 42090699 42090715 POU4F2 JASPAR yes 101693786
chr6 42090699 42090715 POU4F3 JASPAR yes 101693787
chr6 42090700 42090712 HNF1B JASPAR yes 70364236
chr6 42090700 42090712 HNF1B JASPAR yes 101693788
chr6 42090700 42090716 POU4F2 JASPAR yes 70364237
chr6 42090700 42090716 POU4F3 JASPAR yes 70364238
chr6 42090700 42090716 POU4F2 JASPAR yes 101693789
chr6 42090700 42090716 POU4F3 JASPAR yes 101693790
chr6 42090707 42090724 BCL6B JASPAR yes 70364239
chr6 42090707 42090724 BCL6B JASPAR yes 101693791
chr6 42090714 42090727 POU2F2 JASPAR yes 70364240
chr6 42090714 42090727 POU2F2 JASPAR yes 101693792
chr6 42090714 42090728 POU1F1 JASPAR yes 70364241
chr6 42090714 42090728 POU1F1 JASPAR yes 101693793
chr6 42090734 42090740 YY1 JASPAR yes 70364242
chr6 42090734 42090740 YY1 JASPAR yes 101693794
chr6 42090751 42090756 TFAP2A TRANSFAC yes 70364243
chr6 42090751 42090756 TFAP2A TRANSFAC yes 101693795
chr6 42090751 42090757 MZF1 JASPAR yes 70364244
chr6 42090751 42090757 MZF1 JASPAR yes 101693796
chr6 42090753 42090759 MAZ TRANSFAC yes 70364245
chr6 42090753 42090759 MAZ TRANSFAC yes 101693797
chr6 42090757 42090761 LFA1 TRANSFAC yes 70364246
chr6 42090757 42090761 LFA1 TRANSFAC yes 101693798
chr6 42090770 42090785 FOXP1 JASPAR yes 70364247
chr6 42090770 42090785 FOXP1 JASPAR yes 101693799
chr6 42090773 42090784 FOXP2 JASPAR yes 70364248
chr6 42090773 42090784 FOXP2 JASPAR yes 101693800
chr6 42090777 42090783 HiNF-A TRANSFAC yes 70364249
chr6 42090777 42090783 HiNF-A TRANSFAC yes 101693801
chr6 42090788 42090807 CTCF JASPAR yes 70364250
chr6 42090788 42090807 CTCF JASPAR yes 101693802
chr6 42090791 42090805 ZIC1 JASPAR yes 70364251
chr6 42090791 42090805 ZIC1 JASPAR yes 101693803
chr6 42090791 42090806 ZIC3 JASPAR yes 70364252
chr6 42090791 42090806 ZIC4 JASPAR yes 70364253
chr6 42090791 42090806 ZIC3 JASPAR yes 101693804
chr6 42090791 42090806 ZIC4 JASPAR yes 101693805
SNP sites on vista51950[chr6:42090479-42090803]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42090595 rs192990353 C T
ESR1 ESR2
9030064
chr6 42090641 rs142887703 C T
ESR1 SP1 TFAP2A
9030065
chr6 42090642 rs4532438 G A
ESR1 SP1 TFAP2A
9030066
chr6 42090656 rs372566192 T TG
EBF1 ESR1 MZF1 SCRT1 TFAP2A
9030067
chr6 42090656 rs555152077 T TG
EBF1 ESR1 MZF1 SCRT1 TFAP2A
9030068
chr6 42090715 rs188204645 C T
BCL6B ESR1 POU1F1 POU2F2 POU4F2 POU4F3
9030069
chr6 42090790 rs9369339 G A
CTCF
9030070
Genes possibly regulated by vista51950[chr6:42090479-42090803]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41902671 42018095 - CCND3 ENSG00000112576.8 42018095 0.86 0.98 6580 27616
chr6 42018251 42055199 + TAF8 ENSG00000137413.11 42018251 0.74 1.0 6581 27772
chr6 42068856 42110357 - C6orf132 ENSG00000188112.4 42110357 0.89 1.0 6582 80446
chr6 42123144 42147794 + GUCA1A ENSG00000048545.9 42123144 0.85 0.99 6583 67659
chr6 42123279 42131156 + RP1-139D8.6 ENSG00000214732.1 42123279 1.0 0.0 6584 67524
chr6 42152139 42162654 - GUCA1B ENSG00000112599.8 42162654 0.77 1.0 6585 28149
chr6 42174539 42185603 - MRPS10 ENSG00000048544.5 42185603 0.51 0.99 6586 5200
Expression level of Genes
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miRNAs possibly regulated by vista51950[chr6:42090479-42090803]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results