EnhancerDB
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  3. vista51953[chr6:42228452-42228568]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51953[chr6:42228452-42228568]
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Tissue distribution of vista51953
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Transcription factor that possibly regulate vista51953[chr6:42228452-42228568]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42228170 42228694 POLR2A UCSC Txn Factor no Conserved 108540237
chr6 42228381 42228679 USF1 UCSC Txn Factor no Conserved 108540238
chr6 42228392 42228687 USF2 UCSC Txn Factor no Conserved 108540239
chr6 42228442 42228460 ESR1 JASPAR yes 70364341
chr6 42228442 42228460 ESR1 JASPAR yes 101702431
chr6 42228484 42228503 CTCF JASPAR yes 70364342
chr6 42228484 42228503 CTCF JASPAR yes 101702433
chr6 42228484 42228505 ZNF263 JASPAR yes 70364343
chr6 42228484 42228505 ZNF263 JASPAR yes 101702434
chr6 42228485 42228500 ZIC3 JASPAR yes 70364344
chr6 42228485 42228500 ZIC4 JASPAR yes 70364345
chr6 42228485 42228500 ZIC3 JASPAR yes 101702435
chr6 42228485 42228500 ZIC4 JASPAR yes 101702436
chr6 42228486 42228500 ZIC1 JASPAR yes 70364346
chr6 42228486 42228500 ZIC1 JASPAR yes 101702437
chr6 42228495 42228512 RXRA JASPAR yes 70364347
chr6 42228495 42228512 RXRA JASPAR yes 101702438
chr6 42228502 42228507 ETS2 TRANSFAC yes 70364348
chr6 42228502 42228507 ETS2 TRANSFAC yes 101702439
chr6 42228518 42228522 ESR1 TRANSFAC yes 70364349
chr6 42228518 42228522 ESR1 TRANSFAC yes 101702440
chr6 42228518 42228529 USF1 JASPAR yes 70364350
chr6 42228518 42228529 USF1 JASPAR yes 101702441
chr6 42228519 42228529 BHLHE41 JASPAR yes 70364351
chr6 42228519 42228529 SREBF2 JASPAR yes 70364352
chr6 42228519 42228529 TFE3 JASPAR yes 70364353
chr6 42228519 42228529 TFEB JASPAR yes 70364354
chr6 42228519 42228529 TFEC JASPAR yes 70364355
chr6 42228519 42228529 BHLHE41 JASPAR yes 101702442
chr6 42228519 42228529 SREBF2 JASPAR yes 101702443
chr6 42228519 42228529 TFE3 JASPAR yes 101702444
chr6 42228519 42228529 TFEB JASPAR yes 101702445
chr6 42228519 42228529 TFEC JASPAR yes 101702446
chr6 42228519 42228530 USF1 JASPAR yes 70364356
chr6 42228519 42228530 USF2 JASPAR yes 70364357
chr6 42228519 42228530 USF1 JASPAR yes 101702447
chr6 42228519 42228530 USF2 JASPAR yes 101702448
chr6 42228525 42228537 TAL1 JASPAR yes 70364358
chr6 42228525 42228537 TAL1 JASPAR yes 101702449
chr6 42228531 42228546 TFAP2C JASPAR yes 70364359
chr6 42228531 42228546 TFAP2C JASPAR yes 101702450
chr6 42228533 42228545 TFAP2A JASPAR yes 70364360
chr6 42228533 42228545 TFAP2B JASPAR yes 70364361
chr6 42228533 42228545 TFAP2C JASPAR yes 70364362
chr6 42228533 42228545 TFAP2A JASPAR yes 101702451
chr6 42228533 42228545 TFAP2B JASPAR yes 101702452
chr6 42228533 42228545 TFAP2C JASPAR yes 101702453
chr6 42228533 42228548 TFAP2A JASPAR yes 70364363
chr6 42228533 42228548 TFAP2A JASPAR yes 101702454
chr6 42228539 42228554 ESR2 JASPAR yes 70364364
chr6 42228539 42228554 ESR2 JASPAR yes 101702455
chr6 42228542 42228552 TFEB JASPAR yes 70364365
chr6 42228542 42228552 TFEC JASPAR yes 70364366
chr6 42228542 42228552 TFEB JASPAR yes 101702456
chr6 42228542 42228552 TFEC JASPAR yes 101702457
chr6 42228542 42228553 USF1 JASPAR yes 70364367
chr6 42228542 42228553 USF2 JASPAR yes 70364368
chr6 42228542 42228553 USF1 JASPAR yes 101702458
chr6 42228542 42228553 USF2 JASPAR yes 101702459
chr6 42228543 42228553 MAX JASPAR yes 70364369
chr6 42228543 42228553 MAX JASPAR yes 101702460
chr6 42228552 42228558 NFE2 TRANSFAC yes 70364370
chr6 42228552 42228558 NFE2 TRANSFAC yes 101702461
chr6 42228553 42228566 TFAP2A JASPAR yes 70364371
chr6 42228553 42228566 TFAP2B JASPAR yes 70364372
chr6 42228553 42228566 TFAP2C JASPAR yes 70364373
chr6 42228553 42228566 TFAP2A JASPAR yes 101702462
chr6 42228553 42228566 TFAP2B JASPAR yes 101702463
chr6 42228553 42228566 TFAP2C JASPAR yes 101702464
chr6 42228554 42228565 EBF1 JASPAR yes 70364374
chr6 42228554 42228565 EBF1 JASPAR yes 101702465
chr6 42228565 42228586 ZNF263 JASPAR yes 70364375
chr6 42228565 42228586 ZNF263 JASPAR yes 101702466
SNP sites on vista51953[chr6:42228452-42228568]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42228509 rs143547956 G A
POLR2A RXRA USF1 USF2
9031186
chr6 42228567 rs538402864 C T
POLR2A USF1 USF2 ZNF263
9031187
Genes possibly regulated by vista51953[chr6:42228452-42228568]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42152139 42162654 - GUCA1B ENSG00000112599.8 42162654 0.77 1.0 6585 34202
chr6 42174539 42185603 - MRPS10 ENSG00000048544.5 42185603 0.51 0.99 6586 57151
Expression level of Genes
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miRNAs possibly regulated by vista51953[chr6:42228452-42228568]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results