EnhancerDB
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  3. vista51957[chr6:42279921-42280349]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51957[chr6:42279921-42280349]
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Tissue distribution of vista51957
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Transcription factor that possibly regulate vista51957[chr6:42279921-42280349]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42279918 42279922 LFA1 TRANSFAC yes 70364503
chr6 42279918 42279922 LFA1 TRANSFAC yes 101707368
chr6 42279925 42279942 RARA JASPAR yes 70364504
chr6 42279925 42279942 RXRA JASPAR yes 70364505
chr6 42279925 42279942 RARA JASPAR yes 101707369
chr6 42279925 42279942 RXRA JASPAR yes 101707370
chr6 42279936 42279951 NR2C2 JASPAR yes 70364506
chr6 42279936 42279951 NR2C2 JASPAR yes 101707371
chr6 42279943 42279954 EBF1 JASPAR yes 70364507
chr6 42279943 42279954 EBF1 JASPAR yes 101707372
chr6 42279944 42279950 MZF1 JASPAR yes 70364508
chr6 42279944 42279950 MZF1 JASPAR yes 101707373
chr6 42279980 42280001 ZNF263 JASPAR yes 70364509
chr6 42279980 42280001 ZNF263 JASPAR yes 101707374
chr6 42279981 42279989 EHF JASPAR yes 70364510
chr6 42279981 42279989 EHF JASPAR yes 101707375
chr6 42279986 42279990 NFE TRANSFAC yes 70364511
chr6 42279986 42279990 NFE TRANSFAC yes 101707376
chr6 42280012 42280016 LFA1 TRANSFAC yes 70364512
chr6 42280012 42280016 LFA1 TRANSFAC yes 101707377
chr6 42280019 42280025 GATA3 JASPAR yes 70364513
chr6 42280019 42280025 GATA3 JASPAR yes 101707378
chr6 42280029 42280042 ZBTB18 JASPAR yes 70364514
chr6 42280029 42280042 ZBTB18 JASPAR yes 101707379
chr6 42280030 42280042 NHLH1 JASPAR yes 70364515
chr6 42280030 42280042 NHLH1 JASPAR yes 101707380
chr6 42280031 42280041 MSC JASPAR yes 70364516
chr6 42280031 42280041 TFAP4 JASPAR yes 70364517
chr6 42280031 42280041 MSC JASPAR yes 101707381
chr6 42280031 42280041 TFAP4 JASPAR yes 101707382
chr6 42280031 42280043 TAL1 JASPAR yes 70364518
chr6 42280031 42280043 TAL1 JASPAR yes 101707383
chr6 42280039 42280054 TFAP2C JASPAR yes 70364519
chr6 42280039 42280054 TFAP2C JASPAR yes 101707384
chr6 42280067 42280073 YY1 JASPAR yes 70364520
chr6 42280067 42280073 YY1 JASPAR yes 101707385
chr6 42280073 42280086 ZBTB18 JASPAR yes 70364521
chr6 42280073 42280086 ZBTB18 JASPAR yes 101707386
chr6 42280075 42280085 NHLH1 JASPAR yes 70364522
chr6 42280075 42280085 NHLH1 JASPAR yes 101707387
chr6 42280098 42280110 PROX1 JASPAR yes 70364523
chr6 42280098 42280110 PROX1 JASPAR yes 101707388
chr6 42280105 42280120 STAT1 JASPAR yes 70364524
chr6 42280105 42280120 STAT1 JASPAR yes 101707389
chr6 42280107 42280118 STAT1 JASPAR yes 70364525
chr6 42280107 42280118 STAT3 JASPAR yes 70364526
chr6 42280107 42280118 STAT1 JASPAR yes 101707390
chr6 42280107 42280118 STAT3 JASPAR yes 101707391
chr6 42280118 42280129 NFKB1 JASPAR yes 70364527
chr6 42280118 42280129 NFKB1 JASPAR yes 101707392
chr6 42280119 42280129 NFKB1 JASPAR yes 70364528
chr6 42280119 42280129 NFKB1 JASPAR yes 101707393
chr6 42280119 42280130 NFKB1 JASPAR yes 70364529
chr6 42280119 42280130 NFKB1 JASPAR yes 101707394
chr6 42280139 42280145 ETS1 JASPAR yes 70364530
chr6 42280139 42280145 ETS1 JASPAR yes 101707395
chr6 42280139 42280152 HSF1 JASPAR yes 70364531
chr6 42280139 42280152 HSF1 JASPAR yes 101707396
chr6 42280186 42280190 LFA1 TRANSFAC yes 70364532
chr6 42280186 42280190 LFA1 TRANSFAC yes 101707397
chr6 42280238 42280242 H1TF2 TRANSFAC yes 70364533
chr6 42280238 42280242 NFE TRANSFAC yes 70364534
chr6 42280238 42280242 SRF TRANSFAC yes 70364535
chr6 42280238 42280242 H1TF2 TRANSFAC yes 101707398
chr6 42280238 42280242 NFE TRANSFAC yes 101707399
chr6 42280238 42280242 SRF TRANSFAC yes 101707400
chr6 42280241 42280256 LEF1 JASPAR yes 70364536
chr6 42280241 42280256 LEF1 JASPAR yes 101707401
chr6 42280273 42280283 NFATC3 JASPAR yes 70364537
chr6 42280273 42280283 NFATC3 JASPAR yes 101707402
chr6 42280275 42280283 FOXO3 JASPAR yes 70364538
chr6 42280275 42280283 FOXO3 JASPAR yes 101707403
chr6 42280288 42280295 E2F1 TRANSFAC yes 70364539
chr6 42280288 42280295 E2F1 TRANSFAC yes 101707404
chr6 42280312 42280318 ESR1 TRANSFAC yes 70364540
chr6 42280312 42280318 ESR1 TRANSFAC yes 101707405
chr6 42280314 42280318 ESR1 TRANSFAC yes 70364541
chr6 42280314 42280318 ESR1 TRANSFAC yes 101707406
SNP sites on vista51957[chr6:42279921-42280349]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42279987 rs146000709 C T
EHF NFE ZNF263
9031721
chr6 42280036 rs138568381 G C
MSC NHLH1 TAL1 TFAP4 ZBTB18
9031722
chr6 42280241 rs141212699 A C
H1TF2 LEF1 NFE SRF
9031723
chr6 42280348 rs6913527 C T no 9031724
Genes possibly regulated by vista51957[chr6:42279921-42280349]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42174539 42185603 - MRPS10 ENSG00000048544.5 42185603 0.51 0.99 6586 5682
Expression level of Genes
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miRNAs possibly regulated by vista51957[chr6:42279921-42280349]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results