EnhancerDB
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  3. vista51958[chr6:42280829-42281179]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51958[chr6:42280829-42281179]
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Tissue distribution of vista51958
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Transcription factor that possibly regulate vista51958[chr6:42280829-42281179]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42280868 42280873 ETS2 TRANSFAC yes 70364542
chr6 42280868 42280873 ETS2 TRANSFAC yes 101707447
chr6 42280882 42280897 STAT1 JASPAR yes 70364543
chr6 42280882 42280897 STAT1 JASPAR yes 101707448
chr6 42280890 42280906 T JASPAR yes 70364544
chr6 42280890 42280906 T JASPAR yes 101707449
chr6 42280895 42280905 NKX2-3 JASPAR yes 70364545
chr6 42280895 42280905 NKX2-3 JASPAR yes 101707450
chr6 42280899 42280912 NR2F1 JASPAR yes 70364546
chr6 42280899 42280912 NR2F1 JASPAR yes 101707451
chr6 42280901 42280912 ESRRA JASPAR yes 70364547
chr6 42280901 42280912 ESRRB JASPAR yes 70364548
chr6 42280901 42280912 ESRRA JASPAR yes 101707452
chr6 42280901 42280912 ESRRB JASPAR yes 101707453
chr6 42280903 42280920 RARA JASPAR yes 70364549
chr6 42280903 42280920 RARA JASPAR yes 101707454
chr6 42280948 42280953 ETS2 TRANSFAC yes 70364550
chr6 42280948 42280953 ETS2 TRANSFAC yes 101707455
chr6 42280973 42280987 JUN JASPAR yes 70364551
chr6 42280973 42280987 JUN JASPAR yes 101707456
chr6 42280975 42280986 BATF JASPAR yes 70364552
chr6 42280975 42280986 BATF JASPAR yes 101707457
chr6 42280977 42280988 FOS JASPAR yes 70364553
chr6 42280977 42280988 FOSL1 JASPAR yes 70364554
chr6 42280977 42280988 JUND JASPAR yes 70364555
chr6 42280977 42280988 FOS JASPAR yes 101707458
chr6 42280977 42280988 FOSL1 JASPAR yes 101707459
chr6 42280977 42280988 JUND JASPAR yes 101707460
chr6 42280978 42280987 JDP2 JASPAR yes 70364556
chr6 42280978 42280987 JDP2 JASPAR yes 101707461
chr6 42280978 42280989 FOSL2 JASPAR yes 70364557
chr6 42280978 42280989 JUNB JASPAR yes 70364558
chr6 42280978 42280989 FOSL2 JASPAR yes 101707462
chr6 42280978 42280989 JUNB JASPAR yes 101707463
chr6 42280978 42280992 JUN JASPAR yes 70364559
chr6 42280978 42280992 JUN JASPAR yes 101707464
chr6 42280979 42280990 BATF JASPAR yes 70364560
chr6 42280979 42280990 BATF JASPAR yes 101707465
chr6 42281004 42281015 HOXC13 JASPAR yes 70364561
chr6 42281004 42281015 HOXC13 JASPAR yes 101707466
chr6 42281005 42281020 MEF2C JASPAR yes 70364562
chr6 42281005 42281020 MEF2C JASPAR yes 101707467
chr6 42281006 42281021 MEF2A JASPAR yes 70364563
chr6 42281006 42281021 MEF2A JASPAR yes 101707468
chr6 42281007 42281019 MEF2A JASPAR yes 70364564
chr6 42281007 42281019 MEF2A JASPAR yes 101707469
chr6 42281015 42281018 MYB TRANSFAC yes 70364565
chr6 42281015 42281018 MYB TRANSFAC yes 101707470
chr6 42281021 42281028 NKX3-1 JASPAR yes 70364566
chr6 42281021 42281028 NKX3-1 JASPAR yes 101707471
chr6 42281057 42281063 SOX10 JASPAR yes 70364567
chr6 42281057 42281063 SOX10 JASPAR yes 101707472
chr6 42281074 42281087 ELF1 JASPAR yes 70364568
chr6 42281074 42281087 ELF1 JASPAR yes 101707473
chr6 42281074 42281095 ZNF263 JASPAR yes 70364569
chr6 42281074 42281095 ZNF263 JASPAR yes 101707474
chr6 42281075 42281079 LFA1 TRANSFAC yes 70364570
chr6 42281075 42281079 LFA1 TRANSFAC yes 101707475
chr6 42281077 42281088 ELK4 JASPAR yes 70364571
chr6 42281077 42281088 FLI1 JASPAR yes 70364572
chr6 42281077 42281088 ELK4 JASPAR yes 101707476
chr6 42281077 42281088 FLI1 JASPAR yes 101707477
chr6 42281086 42281101 PRDM1 JASPAR yes 70364573
chr6 42281086 42281101 PRDM1 JASPAR yes 101707478
chr6 42281089 42281095 PEA3 TRANSFAC yes 70364574
chr6 42281089 42281095 PEA3 TRANSFAC yes 101707479
chr6 42281159 42281180 ZNF263 JASPAR yes 70364575
chr6 42281159 42281180 ZNF263 JASPAR yes 101707480
chr6 42281161 42281182 IRF1 JASPAR yes 70364576
chr6 42281161 42281182 IRF1 JASPAR yes 101707481
chr6 42281166 42281187 ZNF263 JASPAR yes 70364577
chr6 42281166 42281187 ZNF263 JASPAR yes 101707482
chr6 42281167 42281188 IRF1 JASPAR yes 70364578
chr6 42281167 42281188 IRF1 JASPAR yes 101707483
chr6 42281171 42281192 IRF1 JASPAR yes 70364579
chr6 42281171 42281192 IRF1 JASPAR yes 101707484
chr6 42281173 42281188 PRDM1 JASPAR yes 70364580
chr6 42281173 42281188 PRDM1 JASPAR yes 101707485
SNP sites on vista51958[chr6:42280829-42281179]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42280877 rs902962 A G no 9031730
chr6 42280922 rs186439131 G A no 9031731
chr6 42280970 rs190837017 G A,T no 9031732
Genes possibly regulated by vista51958[chr6:42280829-42281179]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42174539 42185603 - MRPS10 ENSG00000048544.5 42185603 0.51 0.99 6586 4774
Expression level of Genes
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miRNAs possibly regulated by vista51958[chr6:42280829-42281179]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results