EnhancerDB
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  3. vista51959[chr6:42283170-42283354]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51959[chr6:42283170-42283354]
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Tissue distribution of vista51959
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Transcription factor that possibly regulate vista51959[chr6:42283170-42283354]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42283176 42283188 HES5 JASPAR yes 70364581
chr6 42283176 42283188 HES5 JASPAR yes 101707782
chr6 42283177 42283187 CLOCK JASPAR yes 70364582
chr6 42283177 42283187 HEY1 JASPAR yes 70364583
chr6 42283177 42283187 HEY2 JASPAR yes 70364584
chr6 42283177 42283187 CLOCK JASPAR yes 101707783
chr6 42283177 42283187 HEY1 JASPAR yes 101707784
chr6 42283177 42283187 HEY2 JASPAR yes 101707785
chr6 42283178 42283188 MAX JASPAR yes 70364585
chr6 42283178 42283188 MAX JASPAR yes 101707786
chr6 42283179 42283184 MYC TRANSFAC yes 70364586
chr6 42283179 42283184 USF1 TRANSFAC yes 70364587
chr6 42283179 42283184 USF2 TRANSFAC yes 70364588
chr6 42283179 42283184 MYC TRANSFAC yes 101707787
chr6 42283179 42283184 USF1 TRANSFAC yes 101707788
chr6 42283179 42283184 USF2 TRANSFAC yes 101707789
chr6 42283179 42283186 USF1 JASPAR yes 70364589
chr6 42283179 42283186 USF1 JASPAR yes 101707790
chr6 42283213 42283227 TCF7L2 JASPAR yes 70364590
chr6 42283213 42283227 TCF7L2 JASPAR yes 101707791
chr6 42283213 42283228 LEF1 JASPAR yes 70364591
chr6 42283213 42283228 LEF1 JASPAR yes 101707792
chr6 42283217 42283223 TCF4 TRANSFAC yes 70364592
chr6 42283217 42283223 TCF4 TRANSFAC yes 101707793
chr6 42283283 42283303 ESR1 JASPAR yes 70364593
chr6 42283283 42283303 ESR1 JASPAR yes 101707794
chr6 42283284 42283294 RORA JASPAR yes 70364594
chr6 42283284 42283294 RORA JASPAR yes 101707795
chr6 42283285 42283305 PPARG JASPAR yes 70364595
chr6 42283285 42283305 PPARG JASPAR yes 101707796
chr6 42283286 42283304 ESR1 JASPAR yes 70364596
chr6 42283286 42283304 ESR2 JASPAR yes 70364597
chr6 42283286 42283304 ESR1 JASPAR yes 101707797
chr6 42283286 42283304 ESR2 JASPAR yes 101707798
chr6 42283287 42283295 NR4A2 JASPAR yes 70364598
chr6 42283287 42283295 NR4A2 JASPAR yes 101707799
chr6 42283287 42283304 ESR1 JASPAR yes 70364599
chr6 42283287 42283304 ESR1 JASPAR yes 101707800
chr6 42283288 42283303 ESR2 JASPAR yes 70364600
chr6 42283288 42283303 ESR2 JASPAR yes 101707801
chr6 42283288 42283308 ESR1 JASPAR yes 70364601
chr6 42283288 42283308 ESR1 JASPAR yes 101707802
chr6 42283289 42283293 ESR1 TRANSFAC yes 70364602
chr6 42283289 42283293 ESR1 TRANSFAC yes 101707803
chr6 42283297 42283300 MYB TRANSFAC yes 70364603
chr6 42283297 42283300 MYB TRANSFAC yes 101707804
chr6 42283302 42283305 MYB TRANSFAC yes 70364604
chr6 42283302 42283305 MYB TRANSFAC yes 101707805
chr6 42283337 42283343 SOX10 JASPAR yes 70364605
chr6 42283337 42283343 SOX10 JASPAR yes 101707806
chr6 42283337 42283351 RORA JASPAR yes 70364606
chr6 42283337 42283351 RORA JASPAR yes 101707807
chr6 42283340 42283350 RORA JASPAR yes 70364607
chr6 42283340 42283350 RORA JASPAR yes 101707808
chr6 42283341 42283354 NR2F1 JASPAR yes 70364608
chr6 42283341 42283354 NR2F1 JASPAR yes 101707809
chr6 42283344 42283361 RARA JASPAR yes 70364609
chr6 42283344 42283361 RARA JASPAR yes 101707810
chr6 42283345 42283349 ESR1 TRANSFAC yes 70364610
chr6 42283345 42283349 ESR1 TRANSFAC yes 101707811
SNP sites on vista51959[chr6:42283170-42283354]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42283208 rs116391710 G T no 9031753
chr6 42283280 rs571799930 G T no 9031754
Genes possibly regulated by vista51959[chr6:42283170-42283354]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42174539 42185603 - MRPS10 ENSG00000048544.5 42185603 0.51 0.99 6586 2433
Expression level of Genes
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miRNAs possibly regulated by vista51959[chr6:42283170-42283354]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results