EnhancerDB
  1. Home
  2. Enhancers
  3. vista51965[chr6:42334178-42334313]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51965[chr6:42334178-42334313]
Back to top
Tissue distribution of vista51965
Back to top
Transcription factor that possibly regulate vista51965[chr6:42334178-42334313]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42334207 42334210 MYB TRANSFAC yes 70364842
chr6 42334207 42334210 MYB TRANSFAC yes 101713239
chr6 42334211 42334217 ZNF354C JASPAR yes 70364843
chr6 42334211 42334217 ZNF354C JASPAR yes 101713240
chr6 42334219 42334222 MYB TRANSFAC yes 70364844
chr6 42334219 42334222 MYB TRANSFAC yes 101713241
chr6 42334232 42334238 YY1 JASPAR yes 70364845
chr6 42334232 42334238 YY1 JASPAR yes 101713242
chr6 42334248 42334259 E2F6 JASPAR yes 70364846
chr6 42334248 42334259 E2F6 JASPAR yes 101713243
chr6 42334249 42334270 ZNF263 JASPAR yes 70364847
chr6 42334249 42334270 ZNF263 JASPAR yes 101713244
chr6 42334254 42334273 REST JASPAR yes 70364848
chr6 42334254 42334273 REST JASPAR yes 101713245
chr6 42334255 42334276 ZNF263 JASPAR yes 70364849
chr6 42334255 42334276 ZNF263 JASPAR yes 101713246
chr6 42334256 42334267 ELK4 JASPAR yes 70364850
chr6 42334256 42334267 FLI1 JASPAR yes 70364851
chr6 42334256 42334267 ELK4 JASPAR yes 101713247
chr6 42334256 42334267 FLI1 JASPAR yes 101713248
chr6 42334257 42334267 GABPA JASPAR yes 70364852
chr6 42334257 42334267 GABPA JASPAR yes 101713249
chr6 42334257 42334270 ELF1 JASPAR yes 70364853
chr6 42334257 42334270 ELF1 JASPAR yes 101713250
chr6 42334264 42334274 ID4 JASPAR yes 70364854
chr6 42334264 42334274 TCF3 JASPAR yes 70364855
chr6 42334264 42334274 TCF4 JASPAR yes 70364856
chr6 42334264 42334274 ID4 JASPAR yes 101713251
chr6 42334264 42334274 TCF3 JASPAR yes 101713252
chr6 42334264 42334274 TCF4 JASPAR yes 101713253
chr6 42334265 42334274 SNAI2 JASPAR yes 70364857
chr6 42334265 42334274 SNAI2 JASPAR yes 101713254
chr6 42334265 42334276 GCM1 JASPAR yes 70364858
chr6 42334265 42334276 GCM1 JASPAR yes 101713255
chr6 42334266 42334271 USF2 TRANSFAC yes 70364859
chr6 42334266 42334271 USF2 TRANSFAC yes 101713256
chr6 42334275 42334295 ESR1 JASPAR yes 70364860
chr6 42334275 42334295 ESR1 JASPAR yes 101713257
chr6 42334277 42334288 ESRRB JASPAR yes 70364861
chr6 42334277 42334288 ESRRB JASPAR yes 101713258
chr6 42334278 42334296 ESR2 JASPAR yes 70364862
chr6 42334278 42334296 ESR2 JASPAR yes 101713259
chr6 42334280 42334295 ESR2 JASPAR yes 70364863
chr6 42334280 42334295 ESR2 JASPAR yes 101713260
chr6 42334280 42334300 ESR1 JASPAR yes 70364864
chr6 42334280 42334300 ESR1 JASPAR yes 101713261
chr6 42334281 42334296 AR JASPAR yes 70364865
chr6 42334281 42334296 AR JASPAR yes 101713262
chr6 42334292 42334300 EHF JASPAR yes 70364866
chr6 42334292 42334300 EHF JASPAR yes 101713263
chr6 42334294 42334299 ETS2 TRANSFAC yes 70364867
chr6 42334294 42334299 ETS2 TRANSFAC yes 101713264
SNP sites on vista51965[chr6:42334178-42334313]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42334199 rs147581563 G A no 9032212
chr6 42334217 rs114409287 C T
ZNF354C
9032213
chr6 42334224 rs142083381 G A,C no 9032214
Genes possibly regulated by vista51965[chr6:42334178-42334313]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42192669 42419789 - TRERF1 ENSG00000124496.8 42419789 0.66 1.0 6587 14524
Expression level of Genes
Back to top
miRNAs possibly regulated by vista51965[chr6:42334178-42334313]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results