EnhancerDB
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  3. vista51967[chr6:42336033-42336314]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51967[chr6:42336033-42336314]
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Tissue distribution of vista51967
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Transcription factor that possibly regulate vista51967[chr6:42336033-42336314]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42335979 42336292 RUNX3 UCSC Txn Factor no Conserved 108540247
chr6 42336019 42336039 ESR1 JASPAR yes 70364897
chr6 42336019 42336039 ESR1 JASPAR yes 101713430
chr6 42336023 42336040 ESR1 JASPAR yes 70364898
chr6 42336023 42336040 ESR1 JASPAR yes 101713431
chr6 42336027 42336041 PLAG1 JASPAR yes 70364899
chr6 42336027 42336041 PLAG1 JASPAR yes 101713433
chr6 42336032 42336042 MZF1 JASPAR yes 70364900
chr6 42336032 42336042 MZF1 JASPAR yes 101713434
chr6 42336035 42336041 SP1 TRANSFAC yes 70364901
chr6 42336035 42336041 SP1 TRANSFAC yes 101713435
chr6 42336095 42336115 RREB1 JASPAR yes 70364902
chr6 42336095 42336115 RREB1 JASPAR yes 101713436
chr6 42336106 42336120 GLIS2 JASPAR yes 70364903
chr6 42336106 42336120 GLIS3 JASPAR yes 70364904
chr6 42336106 42336120 ZIC1 JASPAR yes 70364905
chr6 42336106 42336120 GLIS2 JASPAR yes 101713437
chr6 42336106 42336120 GLIS3 JASPAR yes 101713438
chr6 42336106 42336120 ZIC1 JASPAR yes 101713439
chr6 42336106 42336121 ZIC3 JASPAR yes 70364906
chr6 42336106 42336121 ZIC4 JASPAR yes 70364907
chr6 42336106 42336121 ZIC3 JASPAR yes 101713440
chr6 42336106 42336121 ZIC4 JASPAR yes 101713441
chr6 42336126 42336138 ZBTB7B JASPAR yes 70364908
chr6 42336126 42336138 ZBTB7B JASPAR yes 101713442
chr6 42336128 42336138 ZNF740 JASPAR yes 70364909
chr6 42336128 42336138 ZNF740 JASPAR yes 101713443
chr6 42336144 42336149 ETS2 TRANSFAC yes 70364910
chr6 42336144 42336149 ETS2 TRANSFAC yes 101713444
chr6 42336152 42336158 TBP TRANSFAC yes 70364911
chr6 42336152 42336158 TBP TRANSFAC yes 101713445
chr6 42336154 42336168 JUN JASPAR yes 70364912
chr6 42336154 42336168 JUN JASPAR yes 101713446
chr6 42336156 42336167 BATF JASPAR yes 70364913
chr6 42336156 42336167 BATF JASPAR yes 101713447
chr6 42336157 42336168 FOSL2 JASPAR yes 70364914
chr6 42336157 42336168 JUNB JASPAR yes 70364915
chr6 42336157 42336168 FOSL2 JASPAR yes 101713448
chr6 42336157 42336168 JUNB JASPAR yes 101713449
chr6 42336158 42336169 FOS JASPAR yes 70364916
chr6 42336158 42336169 FOSL1 JASPAR yes 70364917
chr6 42336158 42336169 JUND JASPAR yes 70364918
chr6 42336158 42336169 NFE2 JASPAR yes 70364919
chr6 42336158 42336169 FOS JASPAR yes 101713450
chr6 42336158 42336169 FOSL1 JASPAR yes 101713451
chr6 42336158 42336169 JUND JASPAR yes 101713452
chr6 42336158 42336169 NFE2 JASPAR yes 101713453
chr6 42336159 42336168 JDP2 JASPAR yes 70364920
chr6 42336159 42336168 JDP2 JASPAR yes 101713454
chr6 42336159 42336170 FOSL2 JASPAR yes 70364921
chr6 42336159 42336170 JUNB JASPAR yes 70364922
chr6 42336159 42336170 FOSL2 JASPAR yes 101713455
chr6 42336159 42336170 JUNB JASPAR yes 101713456
chr6 42336159 42336173 JUN JASPAR yes 70364923
chr6 42336159 42336173 JUN JASPAR yes 101713457
chr6 42336160 42336171 BATF JASPAR yes 70364924
chr6 42336160 42336171 BATF JASPAR yes 101713458
chr6 42336165 42336169 YY1 TRANSFAC yes 70364925
chr6 42336165 42336169 YY1 TRANSFAC yes 101713459
chr6 42336201 42336216 LEF1 JASPAR yes 70364926
chr6 42336201 42336216 LEF1 JASPAR yes 101713460
chr6 42336202 42336223 IRF1 JASPAR yes 70364927
chr6 42336202 42336223 IRF1 JASPAR yes 101713461
chr6 42336203 42336211 GATA3 JASPAR yes 70364928
chr6 42336203 42336211 GATA3 JASPAR yes 101713462
chr6 42336227 42336235 FOXO3 JASPAR yes 70364929
chr6 42336227 42336235 FOXO3 JASPAR yes 101713463
chr6 42336272 42336278 MZF1 JASPAR yes 70364930
chr6 42336272 42336278 MZF1 JASPAR yes 101713464
chr6 42336285 42336303 SRF JASPAR yes 70364931
chr6 42336285 42336303 SRF JASPAR yes 101713465
chr6 42336298 42336308 ELK1 JASPAR yes 70364932
chr6 42336298 42336308 ELK3 JASPAR yes 70364933
chr6 42336298 42336308 ETV3 JASPAR yes 70364934
chr6 42336298 42336308 ELK1 JASPAR yes 101713466
chr6 42336298 42336308 ELK3 JASPAR yes 101713467
chr6 42336298 42336308 ETV3 JASPAR yes 101713468
SNP sites on vista51967[chr6:42336033-42336314]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42336129 rs117010373 G A
RUNX3 ZBTB7B ZNF740
9032230
chr6 42336129 rs577357461 G GC
RUNX3 ZBTB7B ZNF740
9032231
chr6 42336153 rs572708852 T TA
RUNX3 TBP
9032232
chr6 42336154 rs77765856 A T
JUN RUNX3 TBP
9032233
Genes possibly regulated by vista51967[chr6:42336033-42336314]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42192669 42419789 - TRERF1 ENSG00000124496.8 42419789 0.66 1.0 6587 16525
Expression level of Genes
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miRNAs possibly regulated by vista51967[chr6:42336033-42336314]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results