EnhancerDB
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  3. vista51970[chr6:42358029-42358310]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51970[chr6:42358029-42358310]
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Tissue distribution of vista51970
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Transcription factor that possibly regulate vista51970[chr6:42358029-42358310]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42358024 42358034 NFIA JASPAR yes 70365012
chr6 42358024 42358034 NFIA JASPAR yes 101716440
chr6 42358026 42358032 NFIC JASPAR yes 70365013
chr6 42358026 42358032 NFIC JASPAR yes 101716441
chr6 42358032 42358052 RREB1 JASPAR yes 70365014
chr6 42358032 42358052 RREB1 JASPAR yes 101716442
chr6 42358043 42358053 ZNF740 JASPAR yes 70365015
chr6 42358043 42358053 ZNF740 JASPAR yes 101716443
chr6 42358045 42358055 MZF1 JASPAR yes 70365016
chr6 42358045 42358055 MZF1 JASPAR yes 101716444
chr6 42358060 42358080 TP53 JASPAR yes 70365017
chr6 42358060 42358080 TP53 JASPAR yes 101716445
chr6 42358063 42358069 MZF1 JASPAR yes 70365018
chr6 42358063 42358069 MZF1 JASPAR yes 101716446
chr6 42358067 42358079 GRHL1 JASPAR yes 70365019
chr6 42358067 42358079 GRHL1 JASPAR yes 101716447
chr6 42358075 42358085 TBR1 JASPAR yes 70365020
chr6 42358075 42358085 TBR1 JASPAR yes 101716448
chr6 42358075 42358086 TBX20 JASPAR yes 70365021
chr6 42358075 42358086 TBX2 JASPAR yes 70365022
chr6 42358075 42358086 TBX20 JASPAR yes 101716449
chr6 42358075 42358086 TBX2 JASPAR yes 101716450
chr6 42358092 42358111 REST JASPAR yes 70365023
chr6 42358092 42358111 REST JASPAR yes 101716451
chr6 42358124 42358128 YY1 TRANSFAC yes 70365024
chr6 42358124 42358128 YY1 TRANSFAC yes 101716452
chr6 42358128 42358139 FOXA1 JASPAR yes 70365025
chr6 42358128 42358139 FOXA1 JASPAR yes 101716453
chr6 42358128 42358143 FOXA1 JASPAR yes 70365026
chr6 42358128 42358143 FOXA1 JASPAR yes 101716454
chr6 42358129 42358141 FOXC2 JASPAR yes 70365027
chr6 42358129 42358141 FOXC2 JASPAR yes 101716455
chr6 42358130 42358142 FOXI1 JASPAR yes 70365028
chr6 42358130 42358142 FOXI1 JASPAR yes 101716456
chr6 42358147 42358150 MYB TRANSFAC yes 70365029
chr6 42358147 42358150 MYB TRANSFAC yes 101716457
chr6 42358156 42358160 YY1 TRANSFAC yes 70365030
chr6 42358156 42358160 YY1 TRANSFAC yes 101716458
chr6 42358180 42358195 FOXP1 JASPAR yes 70365031
chr6 42358180 42358195 FOXP1 JASPAR yes 101716459
chr6 42358180 42358201 IRF1 JASPAR yes 70365032
chr6 42358180 42358201 IRF1 JASPAR yes 101716460
chr6 42358181 42358196 FOXP1 JASPAR yes 70365033
chr6 42358181 42358196 FOXP1 JASPAR yes 101716461
chr6 42358187 42358201 RORA JASPAR yes 70365034
chr6 42358187 42358201 RORA JASPAR yes 101716462
chr6 42358190 42358200 RORA JASPAR yes 70365035
chr6 42358190 42358200 RORA JASPAR yes 101716463
chr6 42358191 42358204 NR2F1 JASPAR yes 70365036
chr6 42358191 42358204 NR2F1 JASPAR yes 101716464
chr6 42358192 42358207 FOXA1 JASPAR yes 70365037
chr6 42358192 42358207 FOXA1 JASPAR yes 101716465
chr6 42358193 42358201 NR4A2 JASPAR yes 70365038
chr6 42358193 42358201 NR4A2 JASPAR yes 101716466
chr6 42358195 42358199 ESR1 TRANSFAC yes 70365039
chr6 42358195 42358199 ESR1 TRANSFAC yes 101716467
chr6 42358208 42358223 FOXA1 JASPAR yes 70365040
chr6 42358208 42358223 FOXA1 JASPAR yes 101716468
chr6 42358226 42358232 LEF1 TRANSFAC yes 70365041
chr6 42358226 42358232 SOX10 JASPAR yes 70365042
chr6 42358226 42358232 LEF1 TRANSFAC yes 101716469
chr6 42358226 42358232 SOX10 JASPAR yes 101716470
chr6 42358241 42358262 ZNF263 JASPAR yes 70365043
chr6 42358241 42358262 ZNF263 JASPAR yes 101716471
chr6 42358242 42358248 MZF1 JASPAR yes 70365044
chr6 42358242 42358248 MZF1 JASPAR yes 101716472
chr6 42358244 42358265 ZNF263 JASPAR yes 70365045
chr6 42358244 42358265 ZNF263 JASPAR yes 101716473
chr6 42358245 42358256 ELK4 JASPAR yes 70365046
chr6 42358245 42358256 FLI1 JASPAR yes 70365047
chr6 42358245 42358256 ELK4 JASPAR yes 101716474
chr6 42358245 42358256 FLI1 JASPAR yes 101716475
chr6 42358245 42358258 ELF3 JASPAR yes 70365048
chr6 42358245 42358258 ELF3 JASPAR yes 101716476
chr6 42358246 42358256 ELK1 JASPAR yes 70365049
chr6 42358246 42358256 ELK3 JASPAR yes 70365050
chr6 42358246 42358256 ERF JASPAR yes 70365051
chr6 42358246 42358256 ERG JASPAR yes 70365052
chr6 42358246 42358256 ETS1 JASPAR yes 70365053
chr6 42358246 42358256 ETV1 JASPAR yes 70365054
chr6 42358246 42358256 ETV3 JASPAR yes 70365055
chr6 42358246 42358256 ETV4 JASPAR yes 70365056
chr6 42358246 42358256 ETV6 JASPAR yes 70365057
chr6 42358246 42358256 FEV JASPAR yes 70365058
chr6 42358246 42358256 FLI1 JASPAR yes 70365059
chr6 42358246 42358256 GABPA JASPAR yes 70365060
chr6 42358246 42358256 ELK1 JASPAR yes 101716477
chr6 42358246 42358256 ELK3 JASPAR yes 101716478
chr6 42358246 42358256 ERF JASPAR yes 101716479
chr6 42358246 42358256 ERG JASPAR yes 101716480
chr6 42358246 42358256 ETS1 JASPAR yes 101716481
chr6 42358246 42358256 ETV1 JASPAR yes 101716482
chr6 42358246 42358256 ETV3 JASPAR yes 101716483
chr6 42358246 42358256 ETV4 JASPAR yes 101716484
chr6 42358246 42358256 ETV6 JASPAR yes 101716485
chr6 42358246 42358256 FEV JASPAR yes 101716486
chr6 42358246 42358256 FLI1 JASPAR yes 101716487
chr6 42358246 42358256 GABPA JASPAR yes 101716488
chr6 42358246 42358257 ELF5 JASPAR yes 70365061
chr6 42358246 42358257 ETV2 JASPAR yes 70365062
chr6 42358246 42358257 SPDEF JASPAR yes 70365063
chr6 42358246 42358257 ELF5 JASPAR yes 101716489
chr6 42358246 42358257 ETV2 JASPAR yes 101716490
chr6 42358246 42358257 SPDEF JASPAR yes 101716491
chr6 42358246 42358258 EHF JASPAR yes 70365064
chr6 42358246 42358258 ELF1 JASPAR yes 70365065
chr6 42358246 42358258 ELF4 JASPAR yes 70365066
chr6 42358246 42358258 EHF JASPAR yes 101716492
chr6 42358246 42358258 ELF1 JASPAR yes 101716493
chr6 42358246 42358258 ELF4 JASPAR yes 101716494
chr6 42358246 42358259 ELF1 JASPAR yes 70365067
chr6 42358246 42358259 ELF1 JASPAR yes 101716495
chr6 42358246 42358260 SPI1 JASPAR yes 70365068
chr6 42358246 42358260 SPIC JASPAR yes 70365069
chr6 42358246 42358260 SPI1 JASPAR yes 101716496
chr6 42358246 42358260 SPIC JASPAR yes 101716497
chr6 42358247 42358254 SPI1 JASPAR yes 70365070
chr6 42358247 42358254 SPI1 JASPAR yes 101716498
chr6 42358247 42358255 EHF JASPAR yes 70365071
chr6 42358247 42358255 FEV JASPAR yes 70365072
chr6 42358247 42358255 EHF JASPAR yes 101716499
chr6 42358247 42358255 FEV JASPAR yes 101716500
chr6 42358248 42358261 SCRT2 JASPAR yes 70365073
chr6 42358248 42358261 SCRT2 JASPAR yes 101716501
chr6 42358271 42358274 MYB TRANSFAC yes 70365074
chr6 42358271 42358274 MYB TRANSFAC yes 101716502
chr6 42358271 42358286 PRDM1 JASPAR yes 70365075
chr6 42358271 42358286 STAT2 JASPAR yes 70365076
chr6 42358271 42358286 PRDM1 JASPAR yes 101716503
chr6 42358271 42358286 STAT2 JASPAR yes 101716504
chr6 42358275 42358290 MEF2A JASPAR yes 70365077
chr6 42358275 42358290 MEF2A JASPAR yes 101716505
chr6 42358276 42358291 MEF2C JASPAR yes 70365078
chr6 42358276 42358291 MEF2C JASPAR yes 101716506
chr6 42358279 42358283 YY1 TRANSFAC yes 70365079
chr6 42358279 42358283 YY1 TRANSFAC yes 101716507
SNP sites on vista51970[chr6:42358029-42358310]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42358186 rs111912712 GA G
FOXP1 IRF1
9032499
chr6 42358186 rs545699565 GA G
FOXP1 IRF1
9032500
chr6 42358271 rs73733169 G A
MYB PRDM1 STAT2
9032501
Genes possibly regulated by vista51970[chr6:42358029-42358310]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42192669 42419789 - TRERF1 ENSG00000124496.8 42419789 0.66 1.0 6587 38521
Expression level of Genes
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miRNAs possibly regulated by vista51970[chr6:42358029-42358310]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results