EnhancerDB
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  3. vista51977[chr6:42390239-42390257]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51977[chr6:42390239-42390257]
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Tissue distribution of vista51977
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Transcription factor that possibly regulate vista51977[chr6:42390239-42390257]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42390240 42390255 FOXP1 JASPAR yes 70365260
chr6 42390240 42390255 FOXP1 JASPAR yes 101720689
chr6 42390241 42390256 FOXP1 JASPAR yes 70365261
chr6 42390241 42390256 FOXP1 JASPAR yes 101720690
chr6 42390241 42390262 IRF1 JASPAR yes 70365262
chr6 42390241 42390262 IRF1 JASPAR yes 101720691
chr6 42390242 42390257 FOXP1 JASPAR yes 70365263
chr6 42390242 42390257 FOXP1 JASPAR yes 101720692
chr6 42390242 42390263 IRF1 JASPAR yes 70365264
chr6 42390242 42390263 IRF1 JASPAR yes 101720693
chr6 42390243 42390258 FOXP1 JASPAR yes 70365265
chr6 42390243 42390258 FOXP1 JASPAR yes 101720694
chr6 42390243 42390264 IRF1 JASPAR yes 70365266
chr6 42390243 42390264 IRF1 JASPAR yes 101720695
chr6 42390244 42390259 FOXP1 JASPAR yes 70365267
chr6 42390244 42390259 FOXP1 JASPAR yes 101720696
chr6 42390244 42390265 IRF1 JASPAR yes 70365268
chr6 42390244 42390265 IRF1 JASPAR yes 101720697
chr6 42390245 42390260 FOXP1 JASPAR yes 70365269
chr6 42390245 42390260 FOXP1 JASPAR yes 101720698
chr6 42390245 42390266 IRF1 JASPAR yes 70365270
chr6 42390245 42390266 IRF1 JASPAR yes 101720699
chr6 42390246 42390261 FOXP1 JASPAR yes 70365271
chr6 42390246 42390261 FOXP1 JASPAR yes 101720700
chr6 42390246 42390267 IRF1 JASPAR yes 70365272
chr6 42390246 42390267 IRF1 JASPAR yes 101720701
chr6 42390247 42390262 FOXP1 JASPAR yes 70365273
chr6 42390247 42390262 FOXP1 JASPAR yes 101720702
chr6 42390247 42390268 IRF1 JASPAR yes 70365274
chr6 42390247 42390268 IRF1 JASPAR yes 101720703
chr6 42390248 42390263 FOXP1 JASPAR yes 70365275
chr6 42390248 42390263 FOXP1 JASPAR yes 101720704
chr6 42390248 42390269 IRF1 JASPAR yes 70365276
chr6 42390248 42390269 IRF1 JASPAR yes 101720705
chr6 42390249 42390264 FOXP1 JASPAR yes 70365277
chr6 42390249 42390264 FOXP1 JASPAR yes 101720706
chr6 42390249 42390270 IRF1 JASPAR yes 70365278
chr6 42390249 42390270 IRF1 JASPAR yes 101720707
chr6 42390250 42390265 FOXP1 JASPAR yes 70365279
chr6 42390250 42390265 FOXP1 JASPAR yes 101720708
chr6 42390254 42390269 FOXP1 JASPAR yes 70365280
chr6 42390254 42390269 FOXP1 JASPAR yes 101720709
SNP sites on vista51977[chr6:42390239-42390257]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42390242 rs566590882 CAAAA C
FOXP1 IRF1
9032823
chr6 42390242 rs70987594 CAAAA C
FOXP1 IRF1
9032824
chr6 42390242 rs776703487 CAAAA C
FOXP1 IRF1
9032825
Genes possibly regulated by vista51977[chr6:42390239-42390257]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42192669 42419789 - TRERF1 ENSG00000124496.8 42419789 0.66 1.0 6587 70468
Expression level of Genes
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miRNAs possibly regulated by vista51977[chr6:42390239-42390257]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results