EnhancerDB
  1. Home
  2. Enhancers
  3. vista51978[chr6:42409399-42409623]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51978[chr6:42409399-42409623]
Back to top
Tissue distribution of vista51978
Back to top
Transcription factor that possibly regulate vista51978[chr6:42409399-42409623]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42409396 42409411 MEF2C JASPAR yes 70365281
chr6 42409396 42409411 MEF2C JASPAR yes 101722829
chr6 42409398 42409413 FOXP1 JASPAR yes 70365282
chr6 42409398 42409413 FOXP1 JASPAR yes 101722830
chr6 42409398 42409419 IRF1 JASPAR yes 70365283
chr6 42409398 42409419 IRF1 JASPAR yes 101722831
chr6 42409399 42409414 FOXP1 JASPAR yes 70365284
chr6 42409399 42409414 FOXP1 JASPAR yes 101722832
chr6 42409400 42409406 TBP TRANSFAC yes 70365285
chr6 42409400 42409406 TBP TRANSFAC yes 101722833
chr6 42409401 42409416 FOXP1 JASPAR yes 70365286
chr6 42409401 42409416 FOXP1 JASPAR yes 101722834
chr6 42409402 42409423 IRF1 JASPAR yes 70365287
chr6 42409402 42409423 IRF1 JASPAR yes 101722835
chr6 42409403 42409418 FOXP1 JASPAR yes 70365288
chr6 42409403 42409418 FOXP1 JASPAR yes 101722836
chr6 42409403 42409424 IRF1 JASPAR yes 70365289
chr6 42409403 42409424 IRF1 JASPAR yes 101722837
chr6 42409408 42409423 FOXP1 JASPAR yes 70365290
chr6 42409408 42409423 FOXP1 JASPAR yes 101722838
chr6 42409408 42409429 IRF1 JASPAR yes 70365291
chr6 42409408 42409429 IRF1 JASPAR yes 101722839
chr6 42409409 42409430 IRF1 JASPAR yes 70365292
chr6 42409409 42409430 IRF1 JASPAR yes 101722840
chr6 42409413 42409428 STAT2 JASPAR yes 70365293
chr6 42409413 42409428 STAT2 JASPAR yes 101722841
chr6 42409423 42409435 NHLH1 JASPAR yes 70365294
chr6 42409423 42409435 NHLH1 JASPAR yes 101722842
chr6 42409424 42409434 TFAP4 JASPAR yes 70365295
chr6 42409424 42409434 TFAP4 JASPAR yes 101722843
chr6 42409435 42409453 MAFF JASPAR yes 70365296
chr6 42409435 42409453 MAFF JASPAR yes 101722844
chr6 42409436 42409451 MAFK JASPAR yes 70365297
chr6 42409436 42409451 MAFK JASPAR yes 101722845
chr6 42409440 42409451 NRL JASPAR yes 70365298
chr6 42409440 42409451 NRL JASPAR yes 101722846
chr6 42409445 42409449 YY1 TRANSFAC yes 70365299
chr6 42409445 42409449 YY1 TRANSFAC yes 101722847
chr6 42409459 42409462 MYB TRANSFAC yes 70365300
chr6 42409459 42409462 MYB TRANSFAC yes 101722848
chr6 42409486 42409495 TFAP2A JASPAR yes 70365301
chr6 42409486 42409495 TFAP2A JASPAR yes 101722849
chr6 42409498 42409504 HiNF-A TRANSFAC yes 70365302
chr6 42409498 42409504 HiNF-A TRANSFAC yes 101722850
chr6 42409499 42409510 BATF JASPAR yes 70365303
chr6 42409499 42409510 BATF JASPAR yes 101722851
chr6 42409501 42409519 MAFF JASPAR yes 70365304
chr6 42409501 42409519 MAFF JASPAR yes 101722852
chr6 42409509 42409523 RORA JASPAR yes 70365305
chr6 42409509 42409523 RORA JASPAR yes 101722853
chr6 42409510 42409520 RORA JASPAR yes 70365306
chr6 42409510 42409520 RORA JASPAR yes 101722854
chr6 42409526 42409532 MZF1 JASPAR yes 70365307
chr6 42409526 42409532 MZF1 JASPAR yes 101722855
chr6 42409545 42409556 TBX20 JASPAR yes 70365308
chr6 42409545 42409556 TBX20 JASPAR yes 101722856
chr6 42409548 42409561 SMAD2 JASPAR yes 70365309
chr6 42409548 42409561 SMAD2 JASPAR yes 101722857
chr6 42409555 42409567 HES7 JASPAR yes 70365310
chr6 42409555 42409567 HES7 JASPAR yes 101722858
chr6 42409556 42409566 HEY2 JASPAR yes 70365311
chr6 42409556 42409566 HEY2 JASPAR yes 101722859
chr6 42409575 42409583 MEIS2 JASPAR yes 70365312
chr6 42409575 42409583 MEIS3 JASPAR yes 70365313
chr6 42409575 42409583 MEIS2 JASPAR yes 101722860
chr6 42409575 42409583 MEIS3 JASPAR yes 101722861
chr6 42409591 42409595 TEAD2 TRANSFAC yes 70365314
chr6 42409591 42409595 TEAD2 TRANSFAC yes 101722862
chr6 42409591 42409596 TBP TRANSFAC yes 70365315
chr6 42409591 42409596 TBP TRANSFAC yes 101722863
chr6 42409597 42409608 ESRRA JASPAR yes 70365316
chr6 42409597 42409608 ESRRA JASPAR yes 101722864
chr6 42409601 42409605 LFA1 TRANSFAC yes 70365317
chr6 42409601 42409605 LFA1 TRANSFAC yes 101722865
chr6 42409610 42409625 RFX5 JASPAR yes 70365318
chr6 42409610 42409625 RFX5 JASPAR yes 101722866
chr6 42409621 42409633 INSM1 JASPAR yes 70365319
chr6 42409621 42409633 INSM1 JASPAR yes 101722867
SNP sites on vista51978[chr6:42409399-42409623]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42409409 rs58383884 A AG
FOXP1 IRF1 MEF2C
9032985
chr6 42409490 rs148138203 G A
TFAP2A
9032986
chr6 42409492 rs60790159 G C
TFAP2A
9032987
Genes possibly regulated by vista51978[chr6:42409399-42409623]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42192669 42419789 - TRERF1 ENSG00000124496.8 42419789 0.66 1.0 6587 89834
Expression level of Genes
Back to top
miRNAs possibly regulated by vista51978[chr6:42409399-42409623]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results