EnhancerDB
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  3. vista51980[chr6:42420719-42421067]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51980[chr6:42420719-42421067]
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Tissue distribution of vista51980
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Transcription factor that possibly regulate vista51980[chr6:42420719-42421067]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42419870 42421339 POLR2A UCSC Txn Factor no Conserved 108540263
chr6 42420738 42421178 UBTF UCSC Txn Factor no Conserved 108540264
chr6 42420905 42421183 RUNX3 UCSC Txn Factor no Conserved 108540265
chr6 42420977 42421253 EGR1 UCSC Txn Factor no Conserved 108540266
chr6 42420744 42420758 EBF1 JASPAR yes 70365372
chr6 42420746 42420757 EBF1 JASPAR yes 70365373
chr6 42420750 42420755 TFAP2A TRANSFAC yes 70365374
chr6 42420750 42420756 MZF1 JASPAR yes 70365375
chr6 42420750 42420760 SP1 JASPAR yes 70365376
chr6 42420752 42420758 MAZ TRANSFAC yes 70365377
chr6 42420755 42420766 NFKB1 JASPAR yes 70365378
chr6 42420765 42420780 TP53 JASPAR yes 70365379
chr6 42420776 42420795 PAX5 JASPAR yes 70365380
chr6 42420789 42420799 SP1 JASPAR yes 70365381
chr6 42420790 42420800 SP1 JASPAR yes 70365382
chr6 42420791 42420797 MAZ TRANSFAC yes 70365383
chr6 42420791 42420801 SP1 JASPAR yes 70365384
chr6 42420795 42420814 RFX2 JASPAR yes 70365385
chr6 42420813 42420818 SP1 TRANSFAC yes 70365386
chr6 42420813 42420820 SP1 TRANSFAC yes 70365387
chr6 42420813 42420822 SP1 TRANSFAC yes 70365388
chr6 42420813 42420834 ZNF263 JASPAR yes 70365389
chr6 42420819 42420824 SP1 TRANSFAC yes 70365390
chr6 42420823 42420833 SP1 JASPAR yes 70365391
chr6 42420826 42420847 ZNF263 JASPAR yes 70365392
chr6 42420827 42420848 ZNF263 JASPAR yes 70365393
chr6 42420828 42420838 SP1 JASPAR yes 70365394
chr6 42420828 42420849 ZNF263 JASPAR yes 70365395
chr6 42420829 42420838 SP1 TRANSFAC yes 70365396
chr6 42420830 42420836 MAZ TRANSFAC yes 70365397
chr6 42420839 42420849 SP1 JASPAR yes 70365398
chr6 42420848 42420859 NRF1 JASPAR yes 70365399
chr6 42420864 42420875 NRF1 JASPAR yes 70365400
chr6 42420876 42420882 SP1 TRANSFAC yes 70365401
chr6 42420876 42420886 SP1 JASPAR yes 70365402
chr6 42420880 42420891 E2F4 JASPAR yes 70365403
chr6 42420881 42420892 E2F1 JASPAR yes 70365404
chr6 42420896 42420908 TEAD1 JASPAR yes 70365405
chr6 42420904 42420919 RFX5 JASPAR yes 70365406
chr6 42420916 42420923 CEBPA TRANSFAC yes 70365407
chr6 42420925 42420944 CTCF JASPAR yes 70365408
chr6 42420934 42420939 SP1 TRANSFAC yes 70365409
chr6 42420936 42420944 SMAD4 TRANSFAC yes 70365410
chr6 42420938 42420943 SP1 TRANSFAC yes 70365411
chr6 42420939 42420950 TFAP2A JASPAR yes 70365412
chr6 42420939 42420950 TFAP2B JASPAR yes 70365413
chr6 42420939 42420950 TFAP2C JASPAR yes 70365414
chr6 42420940 42420949 TFAP2A JASPAR yes 70365415
chr6 42420954 42420971 PAX1 JASPAR yes 70365416
chr6 42420954 42420971 PAX9 JASPAR yes 70365417
chr6 42420956 42420970 PAX6 JASPAR yes 70365418
chr6 42420964 42420970 ETS1 JASPAR yes 70365419
chr6 42420986 42421007 ZNF263 JASPAR yes 70365420
chr6 42420988 42421003 ZBTB33 JASPAR yes 70365421
chr6 42420996 42421000 NFE TRANSFAC yes 70365422
chr6 42421000 42421010 SP1 JASPAR yes 70365423
chr6 42421003 42421013 SP1 JASPAR yes 70365424
chr6 42421043 42421064 ZNF263 JASPAR yes 70365425
chr6 42421044 42421056 NHLH1 JASPAR yes 70365426
chr6 42421045 42421055 NHLH1 JASPAR yes 70365427
chr6 42421061 42421065 LFA1 TRANSFAC yes 70365428
SNP sites on vista51980[chr6:42420719-42421067]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42420754 rs141787169 G A
EBF1 MAZ MZF1 POLR2A SP1 TFAP2A UBTF
9033074
chr6 42420865 rs1876979 C T
NRF1 POLR2A UBTF
9033075
chr6 42420972 rs549627392 C T
POLR2A RUNX3 UBTF
9033076
chr6 42421038 rs538579475 A G
EGR1 POLR2A RUNX3 UBTF
9033077
Genes possibly regulated by vista51980[chr6:42420719-42421067]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42192669 42419789 - TRERF1 ENSG00000124496.8 42419789 0.66 1.0 6587 99070
Expression level of Genes
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miRNAs possibly regulated by vista51980[chr6:42420719-42421067]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results