EnhancerDB
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  3. vista51983[chr6:42515407-42515543]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51983[chr6:42515407-42515543]
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Tissue distribution of vista51983
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Transcription factor that possibly regulate vista51983[chr6:42515407-42515543]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42515187 42515667 ZNF263 UCSC Txn Factor no Conserved 108540269
chr6 42515187 42515667 ZNF263 UCSC Txn Factor no Conserved 108540270
chr6 42515280 42515900 CTCF UCSC Txn Factor no Conserved 108540271
chr6 42515280 42515900 CTCF UCSC Txn Factor no Conserved 108540272
chr6 42515345 42515636 SMC3 UCSC Txn Factor no Conserved 108540273
chr6 42515358 42515615 RAD21 UCSC Txn Factor no Conserved 108540274
chr6 42515393 42515414 REST JASPAR yes 70365548
chr6 42515393 42515414 REST JASPAR yes 101728535
chr6 42515394 42515413 REST JASPAR yes 70365549
chr6 42515394 42515413 REST JASPAR yes 101728536
chr6 42515407 42515424 BCL6B JASPAR yes 70365550
chr6 42515407 42515424 BCL6B JASPAR yes 101728537
chr6 42515413 42515420 SPIB JASPAR yes 70365551
chr6 42515413 42515420 SPIB JASPAR yes 101728538
chr6 42515455 42515459 H4TF2 TRANSFAC yes 70365552
chr6 42515455 42515459 H4TF2 TRANSFAC yes 101728539
chr6 42515477 42515497 TP63 JASPAR yes 70365553
chr6 42515477 42515497 TP63 JASPAR yes 101728540
chr6 42515487 42515491 LFA1 TRANSFAC yes 70365554
chr6 42515487 42515491 LFA1 TRANSFAC yes 101728541
chr6 42515493 42515512 CTCF JASPAR yes 70365555
chr6 42515493 42515512 CTCF JASPAR yes 101728542
chr6 42515496 42515511 ZIC4 JASPAR yes 70365556
chr6 42515496 42515511 ZIC4 JASPAR yes 101728543
chr6 42515497 42515516 REST JASPAR yes 70365557
chr6 42515497 42515516 REST JASPAR yes 101728544
chr6 42515498 42515511 TFAP2B JASPAR yes 70365558
chr6 42515498 42515511 TFAP2B JASPAR yes 101728545
chr6 42515537 42515552 HNF4A JASPAR yes 70365559
chr6 42515537 42515552 HNF4A JASPAR yes 101728546
chr6 42515538 42515552 NR2F1 JASPAR yes 70365560
chr6 42515538 42515552 NR2F1 JASPAR yes 101728547
chr6 42515538 42515553 HNF4G JASPAR yes 70365561
chr6 42515538 42515553 HNF4G JASPAR yes 101728548
SNP sites on vista51983[chr6:42515407-42515543]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42515412 rs553048431 G C
BCL6B CTCF RAD21 REST SMC3 ZNF263
9033502
chr6 42515541 rs113644593 G A
CTCF HNF4A HNF4G NR2F1 RAD21 SMC3 ZNF263
9033503
Genes possibly regulated by vista51983[chr6:42515407-42515543]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42192669 42419789 - TRERF1 ENSG00000124496.8 42419789 0.66 1.0 6587 4382
chr6 42531800 42661242 + UBR2 ENSG00000024048.6 42531800 0.65 0.99 6588 83743
Expression level of Genes
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miRNAs possibly regulated by vista51983[chr6:42515407-42515543]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results