EnhancerDB
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  3. vista51988[chr6:42678244-42678442]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51988[chr6:42678244-42678442]
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Tissue distribution of vista51988
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Transcription factor that possibly regulate vista51988[chr6:42678244-42678442]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42678239 42678251 ZBTB7A JASPAR yes 70365744
chr6 42678239 42678251 ZBTB7A JASPAR yes 101735603
chr6 42678240 42678255 RUNX2 JASPAR yes 70365745
chr6 42678240 42678255 RUNX2 JASPAR yes 101735604
chr6 42678241 42678251 RUNX3 JASPAR yes 70365746
chr6 42678241 42678251 RUNX3 JASPAR yes 101735605
chr6 42678241 42678252 RUNX1 JASPAR yes 70365747
chr6 42678241 42678252 RUNX1 JASPAR yes 101735606
chr6 42678276 42678282 SOX10 JASPAR yes 70365748
chr6 42678276 42678282 SOX10 JASPAR yes 101735607
chr6 42678313 42678328 MEF2A JASPAR yes 70365749
chr6 42678313 42678328 MEF2A JASPAR yes 101735608
chr6 42678314 42678326 FOXI1 JASPAR yes 70365750
chr6 42678314 42678326 FOXI1 JASPAR yes 101735609
chr6 42678314 42678329 MEF2C JASPAR yes 70365751
chr6 42678314 42678329 MEF2C JASPAR yes 101735610
chr6 42678315 42678327 MEF2A JASPAR yes 70365752
chr6 42678315 42678327 MEF2B JASPAR yes 70365753
chr6 42678315 42678327 MEF2D JASPAR yes 70365754
chr6 42678315 42678327 MEF2A JASPAR yes 101735611
chr6 42678315 42678327 MEF2B JASPAR yes 101735612
chr6 42678315 42678327 MEF2D JASPAR yes 101735613
chr6 42678316 42678326 MEF2A JASPAR yes 70365755
chr6 42678316 42678326 MEF2A JASPAR yes 101735614
chr6 42678317 42678321 YY1 TRANSFAC yes 70365756
chr6 42678317 42678321 YY1 TRANSFAC yes 101735615
chr6 42678329 42678348 RFX2 JASPAR yes 70365757
chr6 42678329 42678348 RFX2 JASPAR yes 101735616
chr6 42678333 42678349 RFX2 JASPAR yes 70365758
chr6 42678333 42678349 RFX3 JASPAR yes 70365759
chr6 42678333 42678349 RFX4 JASPAR yes 70365760
chr6 42678333 42678349 RFX5 JASPAR yes 70365761
chr6 42678333 42678349 RFX2 JASPAR yes 101735617
chr6 42678333 42678349 RFX3 JASPAR yes 101735618
chr6 42678333 42678349 RFX4 JASPAR yes 101735619
chr6 42678333 42678349 RFX5 JASPAR yes 101735620
chr6 42678334 42678353 RFX2 JASPAR yes 70365762
chr6 42678334 42678353 RFX2 JASPAR yes 101735621
chr6 42678361 42678371 GABPA JASPAR yes 70365763
chr6 42678361 42678371 GABPA JASPAR yes 101735622
chr6 42678363 42678369 ETS1 JASPAR yes 70365764
chr6 42678363 42678369 SPI1 JASPAR yes 70365765
chr6 42678363 42678369 ETS1 JASPAR yes 101735623
chr6 42678363 42678369 SPI1 JASPAR yes 101735624
chr6 42678368 42678373 SP1 TRANSFAC yes 70365766
chr6 42678368 42678373 SP1 TRANSFAC yes 101735625
chr6 42678368 42678375 SP1 TRANSFAC yes 70365767
chr6 42678368 42678375 SP1 TRANSFAC yes 101735626
chr6 42678368 42678378 SP1 JASPAR yes 70365768
chr6 42678368 42678378 SP1 JASPAR yes 101735627
chr6 42678368 42678389 ZNF263 JASPAR yes 70365769
chr6 42678368 42678389 ZNF263 JASPAR yes 101735628
chr6 42678369 42678381 TFAP2A JASPAR yes 70365770
chr6 42678369 42678381 TFAP2A JASPAR yes 101735629
chr6 42678370 42678381 TFAP2A JASPAR yes 70365771
chr6 42678370 42678381 TFAP2A JASPAR yes 101735630
chr6 42678371 42678380 TFAP2A JASPAR yes 70365772
chr6 42678371 42678380 TFAP2A JASPAR yes 101735631
chr6 42678374 42678381 SP1 TRANSFAC yes 70365773
chr6 42678374 42678381 SP1 TRANSFAC yes 101735632
chr6 42678374 42678395 ZNF263 JASPAR yes 70365774
chr6 42678374 42678395 ZNF263 JASPAR yes 101735633
chr6 42678376 42678381 SP1 TRANSFAC yes 70365775
chr6 42678376 42678381 SP1 TRANSFAC yes 101735634
chr6 42678383 42678393 SP1 JASPAR yes 70365776
chr6 42678383 42678393 SP1 JASPAR yes 101735635
chr6 42678419 42678433 GATA2 JASPAR yes 70365777
chr6 42678419 42678433 GATA2 JASPAR yes 101735636
chr6 42678421 42678429 GATA3 JASPAR yes 70365778
chr6 42678421 42678429 GATA5 JASPAR yes 70365779
chr6 42678421 42678429 GATA3 JASPAR yes 101735637
chr6 42678421 42678429 GATA5 JASPAR yes 101735638
SNP sites on vista51988[chr6:42678244-42678442]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42678299 rs139650764 G A no 9034096
chr6 42678349 rs2268682 G A
RFX2 RFX3 RFX4 RFX5
9034097
chr6 42678362 rs144177849 C T
GABPA
9034098
chr6 42678363 rs116008903 G A,T
ETS1 GABPA SPI1
9034099
Genes possibly regulated by vista51988[chr6:42678244-42678442]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42664340 42690312 - PRPH2 ENSG00000112619.6 42690312 0.81 1.0 6589 88130
chr6 42712219 42714558 - TBCC ENSG00000124659.5 42714558 0.65 0.99 6590 63884
chr6 42749765 42836298 + GLTSCR1L ENSG00000112624.8 42749765 0.63 1.0 6591 28677
Expression level of Genes
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miRNAs possibly regulated by vista51988[chr6:42678244-42678442]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results