EnhancerDB
  1. Home
  2. Enhancers
  3. vista51989[chr6:42688111-42688359]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51989[chr6:42688111-42688359]
Back to top
Tissue distribution of vista51989
Back to top
Transcription factor that possibly regulate vista51989[chr6:42688111-42688359]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42688130 42688144 TLX1 JASPAR yes 70365780
chr6 42688155 42688167 POU2F1 JASPAR yes 70365781
chr6 42688155 42688168 POU3F3 JASPAR yes 70365782
chr6 42688155 42688169 POU1F1 JASPAR yes 70365783
chr6 42688156 42688168 POU3F1 JASPAR yes 70365784
chr6 42688156 42688168 POU3F2 JASPAR yes 70365785
chr6 42688156 42688169 POU2F2 JASPAR yes 70365786
chr6 42688157 42688165 FOXL1 JASPAR yes 70365787
chr6 42688157 42688166 POU3F4 JASPAR yes 70365788
chr6 42688157 42688166 POU5F1B JASPAR yes 70365789
chr6 42688180 42688186 NFE2 TRANSFAC yes 70365790
chr6 42688193 42688201 MEIS3 JASPAR yes 70365791
chr6 42688194 42688198 NFE TRANSFAC yes 70365792
chr6 42688195 42688206 USF1 JASPAR yes 70365793
chr6 42688195 42688206 USF2 JASPAR yes 70365794
chr6 42688196 42688203 USF2 TRANSFAC yes 70365795
chr6 42688196 42688207 EBF1 JASPAR yes 70365796
chr6 42688198 42688203 USF2 TRANSFAC yes 70365797
chr6 42688203 42688208 ETS2 TRANSFAC yes 70365798
chr6 42688208 42688212 LFA1 TRANSFAC yes 70365799
chr6 42688238 42688243 TFAP2A TRANSFAC yes 70365800
chr6 42688238 42688244 MZF1 JASPAR yes 70365801
chr6 42688262 42688268 ZNF354C JASPAR yes 70365802
chr6 42688265 42688280 FOXP1 JASPAR yes 70365803
chr6 42688268 42688282 IRF7 JASPAR yes 70365804
chr6 42688288 42688299 ESRRA JASPAR yes 70365805
chr6 42688288 42688299 ESRRB JASPAR yes 70365806
chr6 42688289 42688297 NR4A2 JASPAR yes 70365807
chr6 42688290 42688300 RORA JASPAR yes 70365808
chr6 42688290 42688307 RARA JASPAR yes 70365809
chr6 42688308 42688327 CTCF JASPAR yes 70365810
chr6 42688322 42688326 LFA1 TRANSFAC yes 70365811
chr6 42688329 42688333 TEAD2 TRANSFAC yes 70365812
chr6 42688340 42688344 YY1 TRANSFAC yes 70365813
chr6 42688349 42688357 NKX6-1 JASPAR yes 70365814
chr6 42688351 42688355 YY1 TRANSFAC yes 70365815
SNP sites on vista51989[chr6:42688111-42688359]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42688164 rs545144500 A C
FOXL1 POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B
9034168
chr6 42688167 rs3805927 C T
POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3
9034169
chr6 42688213 rs77854794 A T no 9034170
chr6 42688349 rs147426814 C T
NKX6-1
9034171
Genes possibly regulated by vista51989[chr6:42688111-42688359]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42664340 42690312 - PRPH2 ENSG00000112619.6 42690312 0.81 1.0 6589 98047
chr6 42712219 42714558 - TBCC ENSG00000124659.5 42714558 0.65 0.99 6590 73801
chr6 42749765 42836298 + GLTSCR1L ENSG00000112624.8 42749765 0.63 1.0 6591 38594
Expression level of Genes
Back to top
miRNAs possibly regulated by vista51989[chr6:42688111-42688359]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results