EnhancerDB
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  3. vista51990[chr6:42694331-42694739]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51990[chr6:42694331-42694739]
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Tissue distribution of vista51990
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Transcription factor that possibly regulate vista51990[chr6:42694331-42694739]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42694307 42694727 CTCF UCSC Txn Factor no Conserved 108540279
chr6 42694330 42694570 FOXA1 UCSC Txn Factor no Conserved 108540280
chr6 42694374 42694644 SMC3 UCSC Txn Factor no Conserved 108540281
chr6 42694376 42694640 RAD21 UCSC Txn Factor no Conserved 108540282
chr6 42694335 42694356 ZNF263 JASPAR yes 70365816
chr6 42694341 42694362 ZNF263 JASPAR yes 70365817
chr6 42694342 42694363 ZNF263 JASPAR yes 70365818
chr6 42694343 42694348 ETS2 TRANSFAC yes 70365819
chr6 42694346 42694360 SPI1 JASPAR yes 70365820
chr6 42694346 42694360 SPIC JASPAR yes 70365821
chr6 42694347 42694360 ELF1 JASPAR yes 70365822
chr6 42694350 42694357 SPIB JASPAR yes 70365823
chr6 42694372 42694386 STAT1 JASPAR yes 70365824
chr6 42694374 42694395 IRF1 JASPAR yes 70365825
chr6 42694387 42694402 MEF2C JASPAR yes 70365826
chr6 42694388 42694403 MEF2A JASPAR yes 70365827
chr6 42694389 42694401 MEF2A JASPAR yes 70365828
chr6 42694389 42694401 MEF2B JASPAR yes 70365829
chr6 42694389 42694401 MEF2D JASPAR yes 70365830
chr6 42694390 42694400 MEF2A JASPAR yes 70365831
chr6 42694411 42694414 MYB TRANSFAC yes 70365832
chr6 42694411 42694422 PHOX2A JASPAR yes 70365833
chr6 42694434 42694446 E2F8 JASPAR yes 70365834
chr6 42694442 42694455 NR2F1 JASPAR yes 70365835
chr6 42694444 42694455 ESRRA JASPAR yes 70365836
chr6 42694444 42694455 ESRRB JASPAR yes 70365837
chr6 42694446 42694456 RORA JASPAR yes 70365838
chr6 42694455 42694466 HOXC12 JASPAR yes 70365839
chr6 42694456 42694466 HOXD11 JASPAR yes 70365840
chr6 42694470 42694477 CEBPA TRANSFAC yes 70365841
chr6 42694474 42694480 SP1 TRANSFAC yes 70365842
chr6 42694475 42694480 SP1 TRANSFAC yes 70365843
chr6 42694494 42694514 TP53 JASPAR yes 70365844
chr6 42694502 42694508 ZNF354C JASPAR yes 70365845
chr6 42694504 42694523 CTCF JASPAR yes 70365846
chr6 42694507 42694522 ZIC4 JASPAR yes 70365847
chr6 42694507 42694524 RARA JASPAR yes 70365848
chr6 42694517 42694532 MEF2C JASPAR yes 70365849
chr6 42694518 42694533 MEF2A JASPAR yes 70365850
chr6 42694543 42694553 NFATC3 JASPAR yes 70365851
chr6 42694553 42694556 MYB TRANSFAC yes 70365852
chr6 42694566 42694572 MZF1 JASPAR yes 70365853
chr6 42694589 42694610 IRF1 JASPAR yes 70365854
chr6 42694591 42694612 IRF1 JASPAR yes 70365855
chr6 42694604 42694619 AR JASPAR yes 70365856
chr6 42694619 42694625 HiNF-A TRANSFAC yes 70365857
chr6 42694626 42694638 E2F8 JASPAR yes 70365858
chr6 42694695 42694701 TCF4 TRANSFAC yes 70365859
chr6 42694698 42694709 FLI1 JASPAR yes 70365860
chr6 42694699 42694704 ETS2 TRANSFAC yes 70365861
chr6 42694706 42694714 HOXA5 JASPAR yes 70365862
chr6 42694707 42694717 EMX1 JASPAR yes 70365863
chr6 42694707 42694717 EMX2 JASPAR yes 70365864
chr6 42694707 42694717 GBX2 JASPAR yes 70365865
chr6 42694707 42694717 GSX1 JASPAR yes 70365866
chr6 42694707 42694717 GSX2 JASPAR yes 70365867
chr6 42694707 42694717 HOXB2 JASPAR yes 70365868
chr6 42694707 42694717 HOXB3 JASPAR yes 70365869
chr6 42694707 42694717 LHX6 JASPAR yes 70365870
chr6 42694707 42694717 MEOX1 JASPAR yes 70365871
chr6 42694707 42694717 MEOX2 JASPAR yes 70365872
chr6 42694707 42694717 MNX1 JASPAR yes 70365873
chr6 42694707 42694717 POU6F1 JASPAR yes 70365874
chr6 42694707 42694717 RAX JASPAR yes 70365875
chr6 42694708 42694716 LMX1A JASPAR yes 70365876
chr6 42694708 42694716 LMX1B JASPAR yes 70365877
chr6 42694708 42694716 NKX6-1 JASPAR yes 70365878
chr6 42694708 42694716 NKX6-2 JASPAR yes 70365879
chr6 42694708 42694716 PDX1 JASPAR yes 70365880
chr6 42694708 42694716 VAX1 JASPAR yes 70365881
chr6 42694708 42694716 VAX2 JASPAR yes 70365882
chr6 42694708 42694716 VSX1 JASPAR yes 70365883
chr6 42694717 42694721 NFE TRANSFAC yes 70365884
chr6 42694728 42694734 MAZ TRANSFAC yes 70365885
SNP sites on vista51990[chr6:42694331-42694739]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42694506 rs115818874 G T
CTCF FOXA1 RAD21 SMC3 TP53 ZNF354C
9034174
chr6 42694664 rs191143211 A G
CTCF
9034175
Genes possibly regulated by vista51990[chr6:42694331-42694739]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42664340 42690312 - PRPH2 ENSG00000112619.6 42690312 0.81 1.0 6589 95981
chr6 42712219 42714558 - TBCC ENSG00000124659.5 42714558 0.65 0.99 6590 80181
chr6 42749765 42836298 + GLTSCR1L ENSG00000112624.8 42749765 0.63 1.0 6591 44974
Expression level of Genes
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miRNAs possibly regulated by vista51990[chr6:42694331-42694739]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results