EnhancerDB
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  3. vista51999[chr6:42944777-42944970]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51999[chr6:42944777-42944970]
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Tissue distribution of vista51999
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Transcription factor that possibly regulate vista51999[chr6:42944777-42944970]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42944774 42944784 TBX21 JASPAR yes 70366278
chr6 42944774 42944784 TBX21 JASPAR yes 101749469
chr6 42944774 42944785 TBX2 JASPAR yes 70366279
chr6 42944774 42944785 TBX2 JASPAR yes 101749470
chr6 42944774 42944787 EOMES JASPAR yes 70366280
chr6 42944774 42944787 EOMES JASPAR yes 101749471
chr6 42944775 42944783 TBX15 JASPAR yes 70366281
chr6 42944775 42944783 TBX1 JASPAR yes 70366282
chr6 42944775 42944783 TBX4 JASPAR yes 70366283
chr6 42944775 42944783 TBX5 JASPAR yes 70366284
chr6 42944775 42944783 TBX15 JASPAR yes 101749472
chr6 42944775 42944783 TBX1 JASPAR yes 101749473
chr6 42944775 42944783 TBX4 JASPAR yes 101749474
chr6 42944775 42944783 TBX5 JASPAR yes 101749475
chr6 42944789 42944795 YY1 JASPAR yes 70366285
chr6 42944789 42944795 YY1 JASPAR yes 101749476
chr6 42944821 42944824 MYB TRANSFAC yes 70366286
chr6 42944821 42944824 MYB TRANSFAC yes 101749477
chr6 42944844 42944853 SRY JASPAR yes 70366287
chr6 42944844 42944853 SRY JASPAR yes 101749478
chr6 42944863 42944868 GATA2 JASPAR yes 70366288
chr6 42944863 42944868 GATA2 JASPAR yes 101749479
chr6 42944905 42944909 TEAD2 TRANSFAC yes 70366289
chr6 42944905 42944909 TEAD2 TRANSFAC yes 101749480
chr6 42944905 42944910 TBP TRANSFAC yes 70366290
chr6 42944905 42944910 TBP TRANSFAC yes 101749481
chr6 42944924 42944941 BCL6B JASPAR yes 70366291
chr6 42944924 42944941 BCL6B JASPAR yes 101749482
chr6 42944927 42944938 DMRT3 JASPAR yes 70366292
chr6 42944927 42944938 DMRT3 JASPAR yes 101749483
chr6 42944940 42944954 POU1F1 JASPAR yes 70366293
chr6 42944940 42944954 POU1F1 JASPAR yes 101749484
chr6 42944941 42944954 DUXA JASPAR yes 70366294
chr6 42944941 42944954 DUXA JASPAR yes 101749485
chr6 42944942 42944953 DUX4 JASPAR yes 70366295
chr6 42944942 42944953 PHOX2A JASPAR yes 70366296
chr6 42944942 42944953 PROP1 JASPAR yes 70366297
chr6 42944942 42944953 DUX4 JASPAR yes 101749486
chr6 42944942 42944953 PHOX2A JASPAR yes 101749487
chr6 42944942 42944953 PROP1 JASPAR yes 101749488
chr6 42944945 42944955 ALX3 JASPAR yes 70366298
chr6 42944945 42944955 EMX1 JASPAR yes 70366299
chr6 42944945 42944955 EMX2 JASPAR yes 70366300
chr6 42944945 42944955 ESX1 JASPAR yes 70366301
chr6 42944945 42944955 EVX1 JASPAR yes 70366302
chr6 42944945 42944955 EVX2 JASPAR yes 70366303
chr6 42944945 42944955 GBX1 JASPAR yes 70366304
chr6 42944945 42944955 GBX2 JASPAR yes 70366305
chr6 42944945 42944955 GSX1 JASPAR yes 70366306
chr6 42944945 42944955 GSX2 JASPAR yes 70366307
chr6 42944945 42944955 HESX1 JASPAR yes 70366308
chr6 42944945 42944955 HOXA2 JASPAR yes 70366309
chr6 42944945 42944955 HOXB2 JASPAR yes 70366310
chr6 42944945 42944955 HOXB3 JASPAR yes 70366311
chr6 42944945 42944955 LBX2 JASPAR yes 70366312
chr6 42944945 42944955 LHX2 JASPAR yes 70366313
chr6 42944945 42944955 LHX6 JASPAR yes 70366314
chr6 42944945 42944955 MEOX1 JASPAR yes 70366315
chr6 42944945 42944955 MEOX2 JASPAR yes 70366316
chr6 42944945 42944955 MIXL1 JASPAR yes 70366317
chr6 42944945 42944955 MNX1 JASPAR yes 70366318
chr6 42944945 42944955 NOTO JASPAR yes 70366319
chr6 42944945 42944955 POU6F1 JASPAR yes 70366320
chr6 42944945 42944955 RAX JASPAR yes 70366321
chr6 42944945 42944955 ALX3 JASPAR yes 101749489
chr6 42944945 42944955 EMX1 JASPAR yes 101749490
chr6 42944945 42944955 EMX2 JASPAR yes 101749491
chr6 42944945 42944955 ESX1 JASPAR yes 101749492
chr6 42944945 42944955 EVX1 JASPAR yes 101749493
chr6 42944945 42944955 EVX2 JASPAR yes 101749494
chr6 42944945 42944955 GBX1 JASPAR yes 101749495
chr6 42944945 42944955 GBX2 JASPAR yes 101749496
chr6 42944945 42944955 GSX1 JASPAR yes 101749497
chr6 42944945 42944955 GSX2 JASPAR yes 101749498
chr6 42944945 42944955 HESX1 JASPAR yes 101749499
chr6 42944945 42944955 HOXA2 JASPAR yes 101749500
chr6 42944945 42944955 HOXB2 JASPAR yes 101749501
chr6 42944945 42944955 HOXB3 JASPAR yes 101749502
chr6 42944945 42944955 LBX2 JASPAR yes 101749503
chr6 42944945 42944955 LHX2 JASPAR yes 101749504
chr6 42944945 42944955 LHX6 JASPAR yes 101749505
chr6 42944945 42944955 MEOX1 JASPAR yes 101749506
chr6 42944945 42944955 MEOX2 JASPAR yes 101749507
chr6 42944945 42944955 MIXL1 JASPAR yes 101749508
chr6 42944945 42944955 MNX1 JASPAR yes 101749509
chr6 42944945 42944955 NOTO JASPAR yes 101749510
chr6 42944945 42944955 POU6F1 JASPAR yes 101749511
chr6 42944945 42944955 RAX JASPAR yes 101749512
chr6 42944946 42944954 EN1 JASPAR yes 70366322
chr6 42944946 42944954 ISX JASPAR yes 70366323
chr6 42944946 42944954 LBX1 JASPAR yes 70366324
chr6 42944946 42944954 LHX9 JASPAR yes 70366325
chr6 42944946 42944954 PAX4 JASPAR yes 70366326
chr6 42944946 42944954 PDX1 JASPAR yes 70366327
chr6 42944946 42944954 PRRX1 JASPAR yes 70366328
chr6 42944946 42944954 RAX2 JASPAR yes 70366329
chr6 42944946 42944954 SHOX JASPAR yes 70366330
chr6 42944946 42944954 UNCX JASPAR yes 70366331
chr6 42944946 42944954 VAX1 JASPAR yes 70366332
chr6 42944946 42944954 VAX2 JASPAR yes 70366333
chr6 42944946 42944954 VSX1 JASPAR yes 70366334
chr6 42944946 42944954 VSX2 JASPAR yes 70366335
chr6 42944946 42944954 EN1 JASPAR yes 101749513
chr6 42944946 42944954 ISX JASPAR yes 101749514
chr6 42944946 42944954 LBX1 JASPAR yes 101749515
chr6 42944946 42944954 LHX9 JASPAR yes 101749516
chr6 42944946 42944954 PAX4 JASPAR yes 101749517
chr6 42944946 42944954 PDX1 JASPAR yes 101749518
chr6 42944946 42944954 PRRX1 JASPAR yes 101749519
chr6 42944946 42944954 RAX2 JASPAR yes 101749520
chr6 42944946 42944954 SHOX JASPAR yes 101749521
chr6 42944946 42944954 UNCX JASPAR yes 101749522
chr6 42944946 42944954 VAX1 JASPAR yes 101749523
chr6 42944946 42944954 VAX2 JASPAR yes 101749524
chr6 42944946 42944954 VSX1 JASPAR yes 101749525
chr6 42944946 42944954 VSX2 JASPAR yes 101749526
chr6 42944946 42944959 DUXA JASPAR yes 70366336
chr6 42944946 42944959 DUXA JASPAR yes 101749527
chr6 42944947 42944958 PHOX2A JASPAR yes 70366337
chr6 42944947 42944958 PROP1 JASPAR yes 70366338
chr6 42944947 42944958 PHOX2A JASPAR yes 101749528
chr6 42944947 42944958 PROP1 JASPAR yes 101749529
chr6 42944955 42944968 DUXA JASPAR yes 70366339
chr6 42944955 42944968 DUXA JASPAR yes 101749530
chr6 42944961 42944973 POU3F1 JASPAR yes 70366340
chr6 42944961 42944973 POU3F2 JASPAR yes 70366341
chr6 42944961 42944973 POU3F1 JASPAR yes 101749531
chr6 42944961 42944973 POU3F2 JASPAR yes 101749532
chr6 42944961 42944974 POU3F3 JASPAR yes 70366342
chr6 42944961 42944974 POU3F3 JASPAR yes 101749533
chr6 42944962 42944974 POU2F1 JASPAR yes 70366343
chr6 42944962 42944974 POU2F1 JASPAR yes 101749534
chr6 42944963 42944972 POU3F4 JASPAR yes 70366344
chr6 42944963 42944972 POU5F1B JASPAR yes 70366345
chr6 42944963 42944972 POU3F4 JASPAR yes 101749535
chr6 42944963 42944972 POU5F1B JASPAR yes 101749536
chr6 42944965 42944968 MYB TRANSFAC yes 70366346
chr6 42944965 42944968 MYB TRANSFAC yes 101749537
SNP sites on vista51999[chr6:42944777-42944970]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42944811 rs138894555 G A no 9035400
chr6 42944850 rs6907751 C T
SRY
9035401
chr6 42944940 rs114845138 C T
BCL6B POU1F1
9035402
chr6 42944953 rs551702403 AGATT A
ALX3 DUX4 DUXA EMX1 EMX2 EN1 ESX1 EVX1 EVX2 GBX1 GBX2 GSX1 GSX2 HESX1 HOXA2 HOXB2 HOXB3 ISX LBX1 LBX2 LHX2 LHX6 LHX9 MEOX1 MEOX2 MIXL1 MNX1 NOTO PAX4 PDX1 PHOX2A POU1F1 POU6F1 PROP1 PRRX1 RAX RAX2 SHOX UNCX VAX1 VAX2 VSX1 VSX2
9035403
chr6 42944954 rs573339605 G A
ALX3 DUXA EMX1 EMX2 EN1 ESX1 EVX1 EVX2 GBX1 GBX2 GSX1 GSX2 HESX1 HOXA2 HOXB2 HOXB3 ISX LBX1 LBX2 LHX2 LHX6 LHX9 MEOX1 MEOX2 MIXL1 MNX1 NOTO PAX4 PDX1 PHOX2A POU1F1 POU6F1 PROP1 PRRX1 RAX RAX2 SHOX UNCX VAX1 VAX2 VSX1 VSX2
9035404
Genes possibly regulated by vista51999[chr6:42944777-42944970]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42847356 42857663 + RPL7L1 ENSG00000146223.10 42847356 0.64 0.99 6592 2579
chr6 42858005 42858554 - C6orf226 ENSG00000221821.2 42858554 0.54 1.0 6593 13777
chr6 42883727 42893573 + PTCRA ENSG00000171611.5 42883727 1.0 0.99 6594 38950
chr6 42896938 42907025 + CNPY3 ENSG00000137161.12 42896938 0.75 1.0 6595 52161
chr6 42928496 42931618 + GNMT ENSG00000124713.5 42928496 0.97 0.99 6596 83719
chr6 42931608 42946958 - PEX6 ENSG00000124587.9 42946958 0.72 1.0 6597 98012
chr6 42952237 42980080 + PPP2R5D ENSG00000112640.10 42952237 0.58 1.0 6598 92733
chr6 42979832 42981706 - MEA1 ENSG00000124733.3 42981706 0.53 0.99 6599 63264
chr6 42981951 42989036 + KLHDC3 ENSG00000124702.13 42981951 0.48 0.99 6600 63019
chr6 42989383 43001894 + RRP36 ENSG00000124541.6 42989383 0.65 0.99 6601 55587
chr6 43005355 43021683 - CUL7 ENSG00000044090.4 43021683 0.74 1.0 6602 23287
chr6 43008515 43042837 + KLC4 ENSG00000137171.10 43008515 0.78 1.0 6603 36455
chr6 43021767 43027544 - MRPL2 ENSG00000112651.7 43027544 0.71 1.0 6604 17426
chr6 43044006 43129457 + PTK7 ENSG00000112655.11 43044006 0.82 1.0 6605 964
Expression level of Genes
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miRNAs possibly regulated by vista51999[chr6:42944777-42944970]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results