EnhancerDB
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  3. vista520[chr1:16478939-16479163]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista520[chr1:16478939-16479163]
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Tissue distribution of vista520
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Transcription factor that possibly regulate vista520[chr1:16478939-16479163]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 16478944 16478948 H1TF2 TRANSFAC yes 118238646
chr1 16478944 16478948 NFE TRANSFAC yes 118238647
chr1 16478944 16478948 SRF TRANSFAC yes 118238648
chr1 16478968 16478989 ZNF263 JASPAR yes 118238649
chr1 16478975 16478989 PLAG1 JASPAR yes 118238650
chr1 16478976 16478981 TFAP2A TRANSFAC yes 118238651
chr1 16478976 16478982 MZF1 JASPAR yes 118238652
chr1 16478979 16478984 GATA2 JASPAR yes 118238653
chr1 16478985 16478991 MAZ TRANSFAC yes 118238654
chr1 16478992 16479004 INSM1 JASPAR yes 118238655
chr1 16478992 16479004 TFAP2A JASPAR yes 118238656
chr1 16478992 16479004 TFAP2B JASPAR yes 118238657
chr1 16478992 16479004 TFAP2C JASPAR yes 118238658
chr1 16478999 16479003 LFA1 TRANSFAC yes 118238659
chr1 16478999 16479014 ZIC3 JASPAR yes 118238660
chr1 16479000 16479014 ZIC1 JASPAR yes 118238661
chr1 16479008 16479013 SP1 TRANSFAC yes 118238662
chr1 16479009 16479019 SP1 JASPAR yes 118238663
chr1 16479010 16479021 NRF1 JASPAR yes 118238664
chr1 16479011 16479015 LFA1 TRANSFAC yes 118238665
chr1 16479016 16479026 SP1 JASPAR yes 118238666
chr1 16479017 16479021 LFA1 TRANSFAC yes 118238667
chr1 16479021 16479041 TP53 JASPAR yes 118238668
chr1 16479023 16479043 TP63 JASPAR yes 118238669
chr1 16479024 16479042 TP53 JASPAR yes 118238670
chr1 16479024 16479042 TP73 JASPAR yes 118238671
chr1 16479025 16479040 TP53 JASPAR yes 118238672
chr1 16479025 16479045 TP53 JASPAR yes 118238673
chr1 16479026 16479041 TP53 JASPAR yes 118238674
chr1 16479031 16479051 TP53 JASPAR yes 118238675
chr1 16479037 16479046 HIC2 JASPAR yes 118238676
chr1 16479039 16479048 TFAP2A JASPAR yes 118238677
chr1 16479066 16479069 MYB TRANSFAC yes 118238678
chr1 16479081 16479091 TEAD1 JASPAR yes 118238679
chr1 16479081 16479091 TEAD4 JASPAR yes 118238680
chr1 16479082 16479090 TEAD3 JASPAR yes 118238681
chr1 16479083 16479098 HSF1 JASPAR yes 118238682
chr1 16479084 16479097 HSF1 JASPAR yes 118238683
chr1 16479084 16479097 HSF2 JASPAR yes 118238684
chr1 16479084 16479097 HSF4 JASPAR yes 118238685
chr1 16479099 16479110 FLI1 JASPAR yes 118238686
chr1 16479100 16479108 EHF JASPAR yes 118238687
chr1 16479104 16479109 ETS2 TRANSFAC yes 118238688
chr1 16479123 16479128 H4TF1 TRANSFAC yes 118238689
chr1 16479134 16479139 SP1 TRANSFAC yes 118238690
chr1 16479142 16479157 HNF4G JASPAR yes 118238691
chr1 16479147 16479153 SOX10 JASPAR yes 118238692
SNP sites on vista520[chr1:16478939-16479163]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista520[chr1:16478939-16479163]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 16384264 16400127 - FAM131C ENSG00000185519.8 16400127 0.9 1.0 224 21188
chr1 16450832 16482582 - EPHA2 ENSG00000142627.9 16482582 0.81 1.0 225 96581
chr1 16524349 16539104 - ARHGEF19 ENSG00000142632.12 16539104 0.8 1.0 226 40059
chr1 16555368 16556038 - C1orf134 ENSG00000204377.3 16556038 0.68 1.0 227 23125
chr1 16558195 16563657 - RSG1 ENSG00000132881.7 16563657 0.68 1.0 228 15506
Expression level of Genes
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miRNAs possibly regulated by vista520[chr1:16478939-16479163]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results