EnhancerDB
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  3. vista52007[chr6:43228716-43229109]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52007[chr6:43228716-43229109]
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Tissue distribution of vista52007
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Transcription factor that possibly regulate vista52007[chr6:43228716-43229109]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 43228723 43228733 NFIA JASPAR yes 70366671
chr6 43228724 43228733 NFIX JASPAR yes 70366672
chr6 43228725 43228731 NFIC JASPAR yes 70366673
chr6 43228729 43228743 PLAG1 JASPAR yes 70366674
chr6 43228731 43228752 ZNF263 JASPAR yes 70366675
chr6 43228734 43228755 ZNF263 JASPAR yes 70366676
chr6 43228746 43228758 PBX1 JASPAR yes 70366677
chr6 43228756 43228771 AR JASPAR yes 70366678
chr6 43228774 43228785 FLI1 JASPAR yes 70366679
chr6 43228775 43228780 ETS2 TRANSFAC yes 70366680
chr6 43228775 43228783 FEV JASPAR yes 70366681
chr6 43228777 43228792 JUND JASPAR yes 70366682
chr6 43228802 43228816 FOXF2 JASPAR yes 70366683
chr6 43228812 43228816 TEAD2 TRANSFAC yes 70366684
chr6 43228844 43228859 MEF2C JASPAR yes 70366685
chr6 43228847 43228851 YY1 TRANSFAC yes 70366686
chr6 43228862 43228865 MYB TRANSFAC yes 70366687
chr6 43228871 43228882 FOXB1 JASPAR yes 70366688
chr6 43228871 43228882 FOXC1 JASPAR yes 70366689
chr6 43228871 43228883 FOXC2 JASPAR yes 70366690
chr6 43228898 43228902 LFA1 TRANSFAC yes 70366691
chr6 43228903 43228907 H4TF2 TRANSFAC yes 70366692
chr6 43228924 43228939 MEF2A JASPAR yes 70366693
chr6 43228925 43228940 MEF2C JASPAR yes 70366694
chr6 43228928 43228932 YY1 TRANSFAC yes 70366695
chr6 43228934 43228939 ETS2 TRANSFAC yes 70366696
chr6 43228935 43228945 NFKB1 JASPAR yes 70366697
chr6 43228939 43228952 TFAP2A JASPAR yes 70366698
chr6 43228939 43228952 TFAP2B JASPAR yes 70366699
chr6 43228939 43228952 TFAP2C JASPAR yes 70366700
chr6 43228990 43228995 MYB TRANSFAC yes 70366701
chr6 43229006 43229027 ZNF263 JASPAR yes 70366702
chr6 43229011 43229032 IRF1 JASPAR yes 70366703
chr6 43229015 43229029 STAT1 JASPAR yes 70366704
chr6 43229015 43229030 PRDM1 JASPAR yes 70366705
chr6 43229015 43229030 STAT2 JASPAR yes 70366706
chr6 43229015 43229033 IRF2 JASPAR yes 70366707
chr6 43229020 43229026 TCF4 TRANSFAC yes 70366708
chr6 43229027 43229046 REST JASPAR yes 70366709
chr6 43229029 43229041 INSM1 JASPAR yes 70366710
chr6 43229033 43229043 SP1 JASPAR yes 70366711
chr6 43229035 43229044 THAP1 JASPAR yes 70366712
chr6 43229074 43229080 GATA3 JASPAR yes 70366713
SNP sites on vista52007[chr6:43228716-43229109]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 43228958 rs138460813 G A no 9036435
Genes possibly regulated by vista52007[chr6:43228716-43229109]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 43139037 43149243 + SRF ENSG00000112658.6 43139037 0.77 1.0 6606 10321
chr6 43149913 43192325 + CUL9 ENSG00000112659.9 43149913 0.65 1.0 6607 21197
chr6 43193367 43197222 - DNPH1 ENSG00000112667.8 43197222 0.74 1.0 6608 68506
chr6 43211418 43255997 + TTBK1 ENSG00000146216.7 43211418 0.92 0.91 6609 82702
chr6 43263432 43273276 + SLC22A7 ENSG00000137204.10 43263432 1.0 1.0 6610 65677
chr6 43267448 43276535 - CRIP3 ENSG00000146215.9 43276535 0.86 0.95 6611 52574
Expression level of Genes
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miRNAs possibly regulated by vista52007[chr6:43228716-43229109]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results