EnhancerDB
  1. Home
  2. Enhancers
  3. vista52009[chr6:43242978-43243220]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52009[chr6:43242978-43243220]
Back to top
Tissue distribution of vista52009
Back to top
Transcription factor that possibly regulate vista52009[chr6:43242978-43243220]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 43241733 43243175 POLR2A UCSC Txn Factor no Conserved 108540295
chr6 43242722 43243150 TAF1 UCSC Txn Factor no Conserved 108540296
chr6 43242837 43243226 HNF4A UCSC Txn Factor no Conserved 108540297
chr6 43242984 43242991 SP1 TRANSFAC yes 70366771
chr6 43242984 43242991 SP1 TRANSFAC yes 101761183
chr6 43242985 43242992 SP1 TRANSFAC yes 70366772
chr6 43242985 43242992 SP1 TRANSFAC yes 101761184
chr6 43242986 43242991 SP1 TRANSFAC yes 70366773
chr6 43242986 43242991 SP1 TRANSFAC yes 101761185
chr6 43242986 43242992 SP1 TRANSFAC yes 70366774
chr6 43242986 43242992 SP1 TRANSFAC yes 101761186
chr6 43242987 43243001 GLIS2 JASPAR yes 70366775
chr6 43242987 43243001 GLIS3 JASPAR yes 70366776
chr6 43242987 43243001 GLIS2 JASPAR yes 101761187
chr6 43242987 43243001 GLIS3 JASPAR yes 101761188
chr6 43242997 43243011 ZIC1 JASPAR yes 70366777
chr6 43242997 43243011 ZIC1 JASPAR yes 101761189
chr6 43242997 43243012 ZIC3 JASPAR yes 70366778
chr6 43242997 43243012 ZIC4 JASPAR yes 70366779
chr6 43242997 43243012 ZIC3 JASPAR yes 101761190
chr6 43242997 43243012 ZIC4 JASPAR yes 101761191
chr6 43242999 43243011 TFAP2A JASPAR yes 70366780
chr6 43242999 43243011 TFAP2A JASPAR yes 101761192
chr6 43243001 43243010 TFAP2A JASPAR yes 70366781
chr6 43243001 43243010 TFAP2A JASPAR yes 101761193
chr6 43243016 43243031 ZIC3 JASPAR yes 70366782
chr6 43243016 43243031 ZIC3 JASPAR yes 101761194
chr6 43243020 43243026 SP1 TRANSFAC yes 70366783
chr6 43243020 43243026 SP1 TRANSFAC yes 101761195
chr6 43243036 43243042 SP1 TRANSFAC yes 70366784
chr6 43243036 43243042 SP1 TRANSFAC yes 101761196
chr6 43243044 43243055 E2F4 JASPAR yes 70366785
chr6 43243044 43243055 E2F6 JASPAR yes 70366786
chr6 43243044 43243055 E2F4 JASPAR yes 101761197
chr6 43243044 43243055 E2F6 JASPAR yes 101761198
chr6 43243045 43243056 E2F1 JASPAR yes 70366787
chr6 43243045 43243056 E2F1 JASPAR yes 101761199
chr6 43243048 43243055 SP1 TRANSFAC yes 70366788
chr6 43243048 43243055 SP1 TRANSFAC yes 101761200
chr6 43243049 43243054 SP1 TRANSFAC yes 70366789
chr6 43243049 43243054 SP1 TRANSFAC yes 101761201
chr6 43243049 43243055 SP1 TRANSFAC yes 70366790
chr6 43243049 43243055 SP1 TRANSFAC yes 101761202
chr6 43243051 43243060 SP1 TRANSFAC yes 70366791
chr6 43243051 43243060 SP1 TRANSFAC yes 101761203
chr6 43243056 43243066 SP1 JASPAR yes 70366792
chr6 43243056 43243066 SP1 JASPAR yes 101761204
chr6 43243057 43243063 SP1 TRANSFAC yes 70366793
chr6 43243057 43243063 SP1 TRANSFAC yes 101761205
chr6 43243057 43243067 SP1 JASPAR yes 70366794
chr6 43243057 43243067 SP1 JASPAR yes 101761206
chr6 43243066 43243079 NFKB1 JASPAR yes 70366795
chr6 43243066 43243079 NFKB1 JASPAR yes 101761207
chr6 43243072 43243083 EBF1 JASPAR yes 70366796
chr6 43243072 43243083 EBF1 JASPAR yes 101761208
chr6 43243089 43243103 PLAG1 JASPAR yes 70366797
chr6 43243089 43243103 PLAG1 JASPAR yes 101761209
chr6 43243090 43243096 SP1 TRANSFAC yes 70366798
chr6 43243090 43243096 SP1 TRANSFAC yes 101761210
chr6 43243090 43243100 SP1 JASPAR yes 70366799
chr6 43243090 43243100 SP1 JASPAR yes 101761211
chr6 43243093 43243103 SP1 JASPAR yes 70366800
chr6 43243093 43243103 SP1 JASPAR yes 101761212
chr6 43243095 43243100 SP1 TRANSFAC yes 70366801
chr6 43243095 43243100 SP1 TRANSFAC yes 101761213
chr6 43243095 43243101 SP1 TRANSFAC yes 70366802
chr6 43243095 43243101 SP1 TRANSFAC yes 101761214
chr6 43243095 43243102 SP1 TRANSFAC yes 70366803
chr6 43243095 43243102 SP1 TRANSFAC yes 101761215
chr6 43243096 43243117 ZNF263 JASPAR yes 70366804
chr6 43243096 43243117 ZNF263 JASPAR yes 101761216
chr6 43243098 43243112 PLAG1 JASPAR yes 70366805
chr6 43243098 43243112 PLAG1 JASPAR yes 101761217
chr6 43243099 43243109 SP1 JASPAR yes 70366806
chr6 43243099 43243109 SP1 JASPAR yes 101761218
chr6 43243107 43243113 SP1 TRANSFAC yes 70366807
chr6 43243107 43243113 SP1 TRANSFAC yes 101761219
chr6 43243107 43243117 SP1 JASPAR yes 70366808
chr6 43243107 43243117 SP1 JASPAR yes 101761220
chr6 43243112 43243123 E2F4 JASPAR yes 70366809
chr6 43243112 43243123 E2F4 JASPAR yes 101761221
chr6 43243113 43243124 E2F1 JASPAR yes 70366810
chr6 43243113 43243124 E2F1 JASPAR yes 101761222
chr6 43243123 43243137 IRF7 JASPAR yes 70366811
chr6 43243123 43243137 IRF7 JASPAR yes 101761223
chr6 43243123 43243138 IRF9 JASPAR yes 70366812
chr6 43243123 43243138 IRF9 JASPAR yes 101761224
chr6 43243123 43243141 IRF2 JASPAR yes 70366813
chr6 43243123 43243141 IRF2 JASPAR yes 101761225
chr6 43243164 43243168 H4TF2 TRANSFAC yes 70366814
chr6 43243164 43243168 H4TF2 TRANSFAC yes 101761226
chr6 43243168 43243183 TFAP2A JASPAR yes 70366815
chr6 43243168 43243183 TFAP2C JASPAR yes 70366816
chr6 43243168 43243183 TFAP2A JASPAR yes 101761227
chr6 43243168 43243183 TFAP2C JASPAR yes 101761228
chr6 43243170 43243185 TFAP2A JASPAR yes 70366817
chr6 43243170 43243185 TFAP2A JASPAR yes 101761229
chr6 43243171 43243183 TFAP2A JASPAR yes 70366818
chr6 43243171 43243183 TFAP2B JASPAR yes 70366819
chr6 43243171 43243183 TFAP2C JASPAR yes 70366820
chr6 43243171 43243183 TFAP2A JASPAR yes 101761230
chr6 43243171 43243183 TFAP2B JASPAR yes 101761231
chr6 43243171 43243183 TFAP2C JASPAR yes 101761232
chr6 43243171 43243186 TFAP2A JASPAR yes 70366821
chr6 43243171 43243186 TFAP2C JASPAR yes 70366822
chr6 43243171 43243186 TFAP2A JASPAR yes 101761233
chr6 43243171 43243186 TFAP2C JASPAR yes 101761234
chr6 43243172 43243181 TFAP2A JASPAR yes 70366823
chr6 43243172 43243181 TFAP2A JASPAR yes 101761235
chr6 43243173 43243182 TFAP2A JASPAR yes 70366824
chr6 43243173 43243182 TFAP2A JASPAR yes 101761236
chr6 43243176 43243186 SP1 JASPAR yes 70366825
chr6 43243176 43243186 SP1 JASPAR yes 101761237
chr6 43243177 43243185 SP1 TRANSFAC yes 70366826
chr6 43243177 43243185 SP1 TRANSFAC yes 101761238
chr6 43243178 43243183 SP1 TRANSFAC yes 70366827
chr6 43243178 43243183 SP1 TRANSFAC yes 101761239
chr6 43243179 43243184 SP1 TRANSFAC yes 70366828
chr6 43243179 43243184 SP1 TRANSFAC yes 101761240
chr6 43243179 43243185 SP1 TRANSFAC yes 70366829
chr6 43243179 43243185 SP1 TRANSFAC yes 101761241
chr6 43243180 43243188 SP1 TRANSFAC yes 70366830
chr6 43243180 43243188 WT1 TRANSFAC yes 70366831
chr6 43243180 43243188 SP1 TRANSFAC yes 101761242
chr6 43243180 43243188 WT1 TRANSFAC yes 101761243
chr6 43243182 43243189 SP1 TRANSFAC yes 70366832
chr6 43243182 43243189 SP1 TRANSFAC yes 101761244
chr6 43243182 43243192 SP1 JASPAR yes 70366833
chr6 43243182 43243192 SP1 JASPAR yes 101761245
chr6 43243183 43243191 SP1 TRANSFAC yes 70366834
chr6 43243183 43243191 SP1 TRANSFAC yes 101761246
chr6 43243183 43243193 SP1 JASPAR yes 70366835
chr6 43243183 43243193 SP1 JASPAR yes 101761247
chr6 43243184 43243189 SP1 TRANSFAC yes 70366836
chr6 43243184 43243189 SP1 TRANSFAC yes 101761248
chr6 43243185 43243190 SP1 TRANSFAC yes 70366837
chr6 43243185 43243190 SP1 TRANSFAC yes 101761249
chr6 43243197 43243208 NFKB1 JASPAR yes 70366838
chr6 43243197 43243208 NFKB1 JASPAR yes 101761250
chr6 43243198 43243208 NFKB1 JASPAR yes 70366839
chr6 43243198 43243208 NFKB1 JASPAR yes 101761251
chr6 43243198 43243209 NFKB1 JASPAR yes 70366840
chr6 43243198 43243209 NFKB1 JASPAR yes 101761252
chr6 43243198 43243219 REST JASPAR yes 70366841
chr6 43243198 43243219 REST JASPAR yes 101761253
SNP sites on vista52009[chr6:43242978-43243220]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 43243022 rs58537733 C T
HNF4A POLR2A SP1 TAF1 ZIC3
9036513
chr6 43243139 rs201241269 TCCC T
HNF4A IRF2 POLR2A TAF1
9036514
chr6 43243151 rs111739263 G A,T
HNF4A POLR2A
9036515
Genes possibly regulated by vista52009[chr6:43242978-43243220]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 43149913 43192325 + CUL9 ENSG00000112659.9 43149913 0.65 1.0 6607 6935
chr6 43193367 43197222 - DNPH1 ENSG00000112667.8 43197222 0.74 1.0 6608 54244
chr6 43211418 43255997 + TTBK1 ENSG00000146216.7 43211418 0.92 0.91 6609 68440
chr6 43263432 43273276 + SLC22A7 ENSG00000137204.10 43263432 1.0 1.0 6610 79788
chr6 43267448 43276535 - CRIP3 ENSG00000146215.9 43276535 0.86 0.95 6611 66685
chr6 43274872 43337216 - ZNF318 ENSG00000171467.11 43337216 0.61 0.99 6612 6004
Expression level of Genes
Back to top
miRNAs possibly regulated by vista52009[chr6:43242978-43243220]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results