EnhancerDB
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  3. vista52029[chr6:43945256-43945478]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52029[chr6:43945256-43945478]
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Tissue distribution of vista52029
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Transcription factor that possibly regulate vista52029[chr6:43945256-43945478]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 43945191 43945588 RUNX3 UCSC Txn Factor no Conserved 108540357
chr6 43945196 43945600 SPI1 UCSC Txn Factor no Conserved 108540358
chr6 43945196 43945661 RELA UCSC Txn Factor no Conserved 108540359
chr6 43945366 43945646 EBF1 UCSC Txn Factor no Conserved 108540360
chr6 43945276 43945294 IRF2 JASPAR yes 70367832
chr6 43945276 43945294 IRF2 JASPAR yes 101809311
chr6 43945279 43945294 STAT2 JASPAR yes 70367833
chr6 43945279 43945294 STAT2 JASPAR yes 101809312
chr6 43945281 43945293 IRF1 JASPAR yes 70367834
chr6 43945281 43945293 IRF1 JASPAR yes 101809313
chr6 43945281 43945295 IRF8 JASPAR yes 70367835
chr6 43945281 43945295 IRF8 JASPAR yes 101809314
chr6 43945281 43945296 IRF9 JASPAR yes 70367836
chr6 43945281 43945296 IRF9 JASPAR yes 101809315
chr6 43945305 43945315 ETV6 JASPAR yes 70367837
chr6 43945305 43945315 ETV6 JASPAR yes 101809316
chr6 43945306 43945314 EHF JASPAR yes 70367838
chr6 43945306 43945314 EHF JASPAR yes 101809317
chr6 43945307 43945314 SPI1 JASPAR yes 70367839
chr6 43945307 43945314 SPI1 JASPAR yes 101809318
chr6 43945311 43945322 NRL JASPAR yes 70367840
chr6 43945311 43945322 NRL JASPAR yes 101809319
chr6 43945317 43945332 RUNX2 JASPAR yes 70367841
chr6 43945317 43945332 RUNX2 JASPAR yes 101809320
chr6 43945327 43945338 FOSL2 JASPAR yes 70367842
chr6 43945327 43945338 FOSL2 JASPAR yes 101809321
chr6 43945328 43945339 NFE2 JASPAR yes 70367843
chr6 43945328 43945339 NFE2 JASPAR yes 101809322
chr6 43945345 43945354 THAP1 JASPAR yes 70367844
chr6 43945345 43945354 THAP1 JASPAR yes 101809323
chr6 43945348 43945352 LFA1 TRANSFAC yes 70367845
chr6 43945348 43945352 LFA1 TRANSFAC yes 101809324
chr6 43945351 43945366 HNF4A JASPAR yes 70367846
chr6 43945351 43945366 HNF4A JASPAR yes 101809325
chr6 43945352 43945367 HNF4G JASPAR yes 70367847
chr6 43945352 43945367 HNF4G JASPAR yes 101809326
chr6 43945360 43945364 H4TF2 TRANSFAC yes 70367848
chr6 43945360 43945364 H4TF2 TRANSFAC yes 101809327
chr6 43945372 43945392 ESR1 JASPAR yes 70367849
chr6 43945372 43945392 ESR1 JASPAR yes 101809328
chr6 43945375 43945393 ESR2 JASPAR yes 70367850
chr6 43945375 43945393 ESR2 JASPAR yes 101809329
chr6 43945377 43945392 ESR2 JASPAR yes 70367851
chr6 43945377 43945392 ESR2 JASPAR yes 101809330
chr6 43945377 43945397 ESR1 JASPAR yes 70367852
chr6 43945377 43945397 ESR1 JASPAR yes 101809331
chr6 43945403 43945414 STAT3 JASPAR yes 70367853
chr6 43945403 43945414 STAT3 JASPAR yes 101809332
chr6 43945407 43945418 NFKB1 JASPAR yes 70367854
chr6 43945407 43945418 NFKB1 JASPAR yes 101809333
chr6 43945408 43945418 NFKB1 JASPAR yes 70367855
chr6 43945408 43945418 RELA JASPAR yes 70367856
chr6 43945408 43945418 REL JASPAR yes 70367857
chr6 43945408 43945418 NFKB1 JASPAR yes 101809334
chr6 43945408 43945418 RELA JASPAR yes 101809335
chr6 43945408 43945418 REL JASPAR yes 101809336
chr6 43945424 43945439 RUNX2 JASPAR yes 70367858
chr6 43945424 43945439 RUNX2 JASPAR yes 101809337
chr6 43945425 43945434 RUNX2 JASPAR yes 70367859
chr6 43945425 43945434 RUNX2 JASPAR yes 101809338
chr6 43945425 43945435 RUNX3 JASPAR yes 70367860
chr6 43945425 43945435 RUNX3 JASPAR yes 101809339
chr6 43945445 43945453 MEIS2 JASPAR yes 70367861
chr6 43945445 43945453 MEIS3 JASPAR yes 70367862
chr6 43945445 43945453 MEIS2 JASPAR yes 101809340
chr6 43945445 43945453 MEIS3 JASPAR yes 101809341
chr6 43945464 43945483 PAX5 JASPAR yes 70367863
chr6 43945464 43945483 PAX5 JASPAR yes 101809342
chr6 43945474 43945495 IRF1 JASPAR yes 70367864
chr6 43945474 43945495 IRF1 JASPAR yes 101809343
chr6 43945478 43945483 ETS2 TRANSFAC yes 70367865
chr6 43945478 43945483 ETS2 TRANSFAC yes 101809344
chr6 43945478 43945492 STAT1 JASPAR yes 70367866
chr6 43945478 43945492 STAT1 JASPAR yes 101809345
chr6 43945478 43945493 STAT2 JASPAR yes 70367867
chr6 43945478 43945493 STAT2 JASPAR yes 101809346
chr6 43945478 43945496 IRF2 JASPAR yes 70367868
chr6 43945478 43945496 IRF2 JASPAR yes 101809347
SNP sites on vista52029[chr6:43945256-43945478]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 43945314 rs370300120 T C
EHF ETV6 NRL RELA RUNX3 SPI1
9041246
chr6 43945326 rs112468833 A T
RELA RUNX2 RUNX3 SPI1
9041247
chr6 43945355 rs76757114 G A
HNF4A HNF4G RELA RUNX3 SPI1
9041248
chr6 43945435 rs372566574 C G
EBF1 RELA RUNX2 RUNX3 SPI1
9041249
Genes possibly regulated by vista52029[chr6:43945256-43945478]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 43968317 43973695 + C6orf223 ENSG00000181577.11 43968317 0.93 1.0 6626 77161
Expression level of Genes
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miRNAs possibly regulated by vista52029[chr6:43945256-43945478]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results