EnhancerDB
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  3. vista52034[chr6:43978439-43978901]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52034[chr6:43978439-43978901]
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Tissue distribution of vista52034
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Transcription factor that possibly regulate vista52034[chr6:43978439-43978901]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 43978596 43978879 CEBPB UCSC Txn Factor no Conserved 108540361
chr6 43978623 43978765 PRDM1 UCSC Txn Factor no Conserved 108540362
chr6 43978436 43978446 SREBF1 JASPAR yes 70367948
chr6 43978436 43978446 SREBF1 JASPAR yes 101811941
chr6 43978445 43978459 TLX1 JASPAR yes 70367949
chr6 43978445 43978459 TLX1 JASPAR yes 101811942
chr6 43978445 43978465 ESR1 JASPAR yes 70367950
chr6 43978445 43978465 ESR1 JASPAR yes 101811943
chr6 43978446 43978460 TLX1 JASPAR yes 70367951
chr6 43978446 43978460 TLX1 JASPAR yes 101811944
chr6 43978488 43978503 RFX5 JASPAR yes 70367952
chr6 43978488 43978503 RFX5 JASPAR yes 101811945
chr6 43978517 43978525 EHF JASPAR yes 70367953
chr6 43978517 43978525 EHF JASPAR yes 101811946
chr6 43978568 43978582 EBF1 JASPAR yes 70367954
chr6 43978568 43978582 EBF1 JASPAR yes 101811947
chr6 43978569 43978580 EBF1 JASPAR yes 70367955
chr6 43978569 43978580 EBF1 JASPAR yes 101811948
chr6 43978570 43978584 PLAG1 JASPAR yes 70367956
chr6 43978570 43978584 PLAG1 JASPAR yes 101811949
chr6 43978578 43978591 TFAP2B JASPAR yes 70367957
chr6 43978578 43978591 TFAP2B JASPAR yes 101811950
chr6 43978579 43978591 TFAP2A JASPAR yes 70367958
chr6 43978579 43978591 TFAP2A JASPAR yes 101811951
chr6 43978579 43978593 PLAG1 JASPAR yes 70367959
chr6 43978579 43978593 PLAG1 JASPAR yes 101811952
chr6 43978586 43978603 RARA JASPAR yes 70367960
chr6 43978586 43978603 RARA JASPAR yes 101811953
chr6 43978595 43978613 NR3C1 JASPAR yes 70367961
chr6 43978595 43978613 NR3C1 JASPAR yes 101811954
chr6 43978598 43978602 ESR1 TRANSFAC yes 70367962
chr6 43978598 43978602 ESR1 TRANSFAC yes 101811955
chr6 43978635 43978639 NFE TRANSFAC yes 70367963
chr6 43978635 43978639 NFE TRANSFAC yes 101811956
chr6 43978660 43978674 CREB3L1 JASPAR yes 70367964
chr6 43978660 43978674 CREB3L1 JASPAR yes 101811957
chr6 43978667 43978671 NFE TRANSFAC yes 70367965
chr6 43978667 43978671 NFE TRANSFAC yes 101811958
chr6 43978668 43978682 JUN JASPAR yes 70367966
chr6 43978668 43978682 JUN JASPAR yes 101811959
chr6 43978671 43978682 FOSL2 JASPAR yes 70367967
chr6 43978671 43978682 JUNB JASPAR yes 70367968
chr6 43978671 43978682 FOSL2 JASPAR yes 101811960
chr6 43978671 43978682 JUNB JASPAR yes 101811961
chr6 43978672 43978683 FOS JASPAR yes 70367969
chr6 43978672 43978683 FOSL1 JASPAR yes 70367970
chr6 43978672 43978683 JUND JASPAR yes 70367971
chr6 43978672 43978683 NFE2 JASPAR yes 70367972
chr6 43978672 43978683 FOS JASPAR yes 101811962
chr6 43978672 43978683 FOSL1 JASPAR yes 101811963
chr6 43978672 43978683 JUND JASPAR yes 101811964
chr6 43978672 43978683 NFE2 JASPAR yes 101811965
chr6 43978673 43978680 JUN TRANSFAC yes 70367973
chr6 43978673 43978680 JUN TRANSFAC yes 101811966
chr6 43978673 43978682 JDP2 JASPAR yes 70367974
chr6 43978673 43978682 JDP2 JASPAR yes 101811967
chr6 43978673 43978684 FOSL2 JASPAR yes 70367975
chr6 43978673 43978684 JUNB JASPAR yes 70367976
chr6 43978673 43978684 FOSL2 JASPAR yes 101811968
chr6 43978673 43978684 JUNB JASPAR yes 101811969
chr6 43978673 43978687 JUN JASPAR yes 70367977
chr6 43978673 43978687 JUN JASPAR yes 101811970
chr6 43978681 43978694 ZBTB18 JASPAR yes 70367978
chr6 43978681 43978694 ZBTB18 JASPAR yes 101811971
chr6 43978681 43978700 CTCF JASPAR yes 70367979
chr6 43978681 43978700 CTCF JASPAR yes 101811972
chr6 43978683 43978693 MSC JASPAR yes 70367980
chr6 43978683 43978693 MSC JASPAR yes 101811973
chr6 43978689 43978698 HIC2 JASPAR yes 70367981
chr6 43978689 43978698 HIC2 JASPAR yes 101811974
chr6 43978692 43978696 LFA1 TRANSFAC yes 70367982
chr6 43978692 43978696 LFA1 TRANSFAC yes 101811975
chr6 43978711 43978728 RARA JASPAR yes 70367983
chr6 43978711 43978728 RARA JASPAR yes 101811976
chr6 43978722 43978729 JUN TRANSFAC yes 70367984
chr6 43978722 43978729 JUN TRANSFAC yes 101811977
chr6 43978736 43978745 VENTX JASPAR yes 70367985
chr6 43978736 43978745 VENTX JASPAR yes 101811978
chr6 43978736 43978746 EN2 JASPAR yes 70367986
chr6 43978736 43978746 GBX1 JASPAR yes 70367987
chr6 43978736 43978746 GBX2 JASPAR yes 70367988
chr6 43978736 43978746 HESX1 JASPAR yes 70367989
chr6 43978736 43978746 HOXB3 JASPAR yes 70367990
chr6 43978736 43978746 LBX2 JASPAR yes 70367991
chr6 43978736 43978746 RAX JASPAR yes 70367992
chr6 43978736 43978746 EN2 JASPAR yes 101811979
chr6 43978736 43978746 GBX1 JASPAR yes 101811980
chr6 43978736 43978746 GBX2 JASPAR yes 101811981
chr6 43978736 43978746 HESX1 JASPAR yes 101811982
chr6 43978736 43978746 HOXB3 JASPAR yes 101811983
chr6 43978736 43978746 LBX2 JASPAR yes 101811984
chr6 43978736 43978746 RAX JASPAR yes 101811985
chr6 43978737 43978745 BARX1 JASPAR yes 70367993
chr6 43978737 43978745 EN1 JASPAR yes 70367994
chr6 43978737 43978745 ISL2 JASPAR yes 70367995
chr6 43978737 43978745 MSX1 JASPAR yes 70367996
chr6 43978737 43978745 MSX2 JASPAR yes 70367997
chr6 43978737 43978745 PDX1 JASPAR yes 70367998
chr6 43978737 43978745 BARX1 JASPAR yes 101811986
chr6 43978737 43978745 EN1 JASPAR yes 101811987
chr6 43978737 43978745 ISL2 JASPAR yes 101811988
chr6 43978737 43978745 MSX1 JASPAR yes 101811989
chr6 43978737 43978745 MSX2 JASPAR yes 101811990
chr6 43978737 43978745 PDX1 JASPAR yes 101811991
chr6 43978755 43978776 REST JASPAR yes 70367999
chr6 43978755 43978776 REST JASPAR yes 101811992
chr6 43978814 43978823 RUNX2 JASPAR yes 70368000
chr6 43978814 43978823 RUNX2 JASPAR yes 101811993
chr6 43978838 43978842 YY1 TRANSFAC yes 70368001
chr6 43978838 43978842 YY1 TRANSFAC yes 101811994
chr6 43978892 43978910 NR3C1 JASPAR yes 70368002
chr6 43978892 43978910 NR3C1 JASPAR yes 101811995
chr6 43978901 43978906 MYC TRANSFAC yes 70368003
chr6 43978901 43978906 MYC TRANSFAC yes 101811996
SNP sites on vista52034[chr6:43978439-43978901]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 43978572 rs565794367 C G,T
EBF1 PLAG1
9041616
chr6 43978586 rs73736914 A G
PLAG1 RARA TFAP2A TFAP2B
9041617
chr6 43978669 rs111703704 T C
CEBPB CREB3L1 JUN NFE PRDM1
9041618
chr6 43978670 rs143899815 G A
CEBPB CREB3L1 JUN NFE PRDM1
9041619
chr6 43978825 rs186252474 G A
CEBPB
9041620
Genes possibly regulated by vista52034[chr6:43978439-43978901]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 43968317 43973695 + C6orf223 ENSG00000181577.11 43968317 0.93 1.0 6626 89878
Expression level of Genes
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miRNAs possibly regulated by vista52034[chr6:43978439-43978901]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results