EnhancerDB
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  3. vista52036[chr6:43990134-43990470]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52036[chr6:43990134-43990470]
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Tissue distribution of vista52036
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Transcription factor that possibly regulate vista52036[chr6:43990134-43990470]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 43990206 43990454 SPI1 UCSC Txn Factor no Conserved 108540369
chr6 43990134 43990139 TFAP2A TRANSFAC yes 70368083
chr6 43990134 43990139 TFAP2A TRANSFAC yes 101813695
chr6 43990134 43990140 MZF1 JASPAR yes 70368084
chr6 43990134 43990140 MZF1 JASPAR yes 101813696
chr6 43990147 43990157 NFIA JASPAR yes 70368085
chr6 43990147 43990157 NFIA JASPAR yes 101813697
chr6 43990148 43990157 NFIX JASPAR yes 70368086
chr6 43990148 43990157 NFIX JASPAR yes 101813698
chr6 43990149 43990155 NFIC JASPAR yes 70368087
chr6 43990149 43990155 NFIC JASPAR yes 101813699
chr6 43990156 43990168 YY1 JASPAR yes 70368088
chr6 43990156 43990168 YY1 JASPAR yes 101813700
chr6 43990159 43990165 YY1 JASPAR yes 70368089
chr6 43990159 43990165 YY1 JASPAR yes 101813701
chr6 43990167 43990172 SP1 TRANSFAC yes 70368090
chr6 43990167 43990172 SP1 TRANSFAC yes 101813702
chr6 43990195 43990209 JUN JASPAR yes 70368091
chr6 43990195 43990209 JUN JASPAR yes 101813703
chr6 43990197 43990208 BATF JASPAR yes 70368092
chr6 43990197 43990208 BATF JASPAR yes 101813704
chr6 43990198 43990209 FOSL2 JASPAR yes 70368093
chr6 43990198 43990209 JUNB JASPAR yes 70368094
chr6 43990198 43990209 FOSL2 JASPAR yes 101813705
chr6 43990198 43990209 JUNB JASPAR yes 101813706
chr6 43990199 43990208 NFE2 TRANSFAC yes 70368095
chr6 43990199 43990208 NFE2 TRANSFAC yes 101813707
chr6 43990199 43990210 FOS JASPAR yes 70368096
chr6 43990199 43990210 FOSL1 JASPAR yes 70368097
chr6 43990199 43990210 JUND JASPAR yes 70368098
chr6 43990199 43990210 NFE2 JASPAR yes 70368099
chr6 43990199 43990210 FOS JASPAR yes 101813708
chr6 43990199 43990210 FOSL1 JASPAR yes 101813709
chr6 43990199 43990210 JUND JASPAR yes 101813710
chr6 43990199 43990210 NFE2 JASPAR yes 101813711
chr6 43990200 43990209 JDP2 JASPAR yes 70368100
chr6 43990200 43990209 JDP2 JASPAR yes 101813712
chr6 43990200 43990211 FOSL2 JASPAR yes 70368101
chr6 43990200 43990211 JUNB JASPAR yes 70368102
chr6 43990200 43990211 FOSL2 JASPAR yes 101813713
chr6 43990200 43990211 JUNB JASPAR yes 101813714
chr6 43990200 43990214 JUN JASPAR yes 70368103
chr6 43990200 43990214 JUN JASPAR yes 101813715
chr6 43990201 43990212 BATF JASPAR yes 70368104
chr6 43990201 43990212 BATF JASPAR yes 101813716
chr6 43990223 43990227 YY1 TRANSFAC yes 70368105
chr6 43990223 43990227 YY1 TRANSFAC yes 101813717
chr6 43990227 43990246 RFX2 JASPAR yes 70368106
chr6 43990227 43990246 RFX2 JASPAR yes 101813718
chr6 43990231 43990247 RFX5 JASPAR yes 70368107
chr6 43990231 43990247 RFX5 JASPAR yes 101813719
chr6 43990242 43990254 PROX1 JASPAR yes 70368108
chr6 43990242 43990254 PROX1 JASPAR yes 101813720
chr6 43990281 43990290 POU3F4 JASPAR yes 70368109
chr6 43990281 43990290 POU3F4 JASPAR yes 101813721
chr6 43990306 43990321 RUNX2 JASPAR yes 70368110
chr6 43990306 43990321 RUNX2 JASPAR yes 101813722
chr6 43990317 43990330 SMAD2 JASPAR yes 70368111
chr6 43990317 43990330 SMAD2 JASPAR yes 101813723
chr6 43990324 43990345 IRF1 JASPAR yes 70368112
chr6 43990324 43990345 IRF1 JASPAR yes 101813724
chr6 43990326 43990341 STAT2 JASPAR yes 70368113
chr6 43990326 43990341 STAT2 JASPAR yes 101813725
chr6 43990327 43990341 SPI1 JASPAR yes 70368114
chr6 43990327 43990341 SPIC JASPAR yes 70368115
chr6 43990327 43990341 SPI1 JASPAR yes 101813726
chr6 43990327 43990341 SPIC JASPAR yes 101813727
chr6 43990338 43990343 ETS2 TRANSFAC yes 70368116
chr6 43990338 43990343 ETS2 TRANSFAC yes 101813728
chr6 43990369 43990380 FOS JASPAR yes 70368117
chr6 43990369 43990380 JUND JASPAR yes 70368118
chr6 43990369 43990380 FOS JASPAR yes 101813729
chr6 43990369 43990380 JUND JASPAR yes 101813730
chr6 43990370 43990384 JUN JASPAR yes 70368119
chr6 43990370 43990384 JUN JASPAR yes 101813731
chr6 43990371 43990382 BATF JASPAR yes 70368120
chr6 43990371 43990382 BATF JASPAR yes 101813732
chr6 43990393 43990410 RARA JASPAR yes 70368121
chr6 43990393 43990410 RARA JASPAR yes 101813733
chr6 43990394 43990398 LFA1 TRANSFAC yes 70368122
chr6 43990394 43990398 LFA1 TRANSFAC yes 101813734
chr6 43990405 43990409 H4TF2 TRANSFAC yes 70368123
chr6 43990405 43990409 H4TF2 TRANSFAC yes 101813735
chr6 43990414 43990431 RARA JASPAR yes 70368124
chr6 43990414 43990431 RARA JASPAR yes 101813736
chr6 43990417 43990425 GATA3 JASPAR yes 70368125
chr6 43990417 43990425 GATA5 JASPAR yes 70368126
chr6 43990417 43990425 GATA3 JASPAR yes 101813737
chr6 43990417 43990425 GATA5 JASPAR yes 101813738
chr6 43990437 43990458 ZNF263 JASPAR yes 70368127
chr6 43990437 43990458 ZNF263 JASPAR yes 101813739
chr6 43990443 43990464 ZNF263 JASPAR yes 70368128
chr6 43990443 43990464 ZNF263 JASPAR yes 101813740
chr6 43990458 43990464 MZF1 JASPAR yes 70368129
chr6 43990458 43990464 MZF1 JASPAR yes 101813741
chr6 43990462 43990480 ESR2 JASPAR yes 70368130
chr6 43990462 43990480 ESR2 JASPAR yes 101813742
chr6 43990463 43990475 YY1 JASPAR yes 70368131
chr6 43990463 43990475 YY1 JASPAR yes 101813743
chr6 43990468 43990472 YY1 TRANSFAC yes 70368132
chr6 43990468 43990472 YY1 TRANSFAC yes 101813744
SNP sites on vista52036[chr6:43990134-43990470]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 43990135 rs138773369 TG T
MZF1 TFAP2A
9041746
chr6 43990135 rs769276394 TG T
MZF1 TFAP2A
9041747
chr6 43990199 rs6907643 C T
BATF FOS FOSL1 FOSL2 JUN JUNB JUND NFE2
9041748
chr6 43990205 rs138817621 C T
BATF FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND NFE2
9041749
chr6 43990365 rs116375488 G A
SPI1
9041750
chr6 43990432 rs150174551 A C,G
SPI1
9041751
Genes possibly regulated by vista52036[chr6:43990134-43990470]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 43968317 43973695 + C6orf223 ENSG00000181577.11 43968317 0.93 1.0 6626 78183
Expression level of Genes
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miRNAs possibly regulated by vista52036[chr6:43990134-43990470]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results