EnhancerDB
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  3. vista52037[chr6:44002049-44002379]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52037[chr6:44002049-44002379]
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Tissue distribution of vista52037
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Transcription factor that possibly regulate vista52037[chr6:44002049-44002379]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 44002352 44002574 TFAP2C UCSC Txn Factor no Conserved 108540370
chr6 44002048 44002063 RFX5 JASPAR yes 70368133
chr6 44002048 44002063 RFX5 JASPAR yes 101815497
chr6 44002060 44002081 ZNF263 JASPAR yes 70368134
chr6 44002060 44002081 ZNF263 JASPAR yes 101815498
chr6 44002073 44002084 FLI1 JASPAR yes 70368135
chr6 44002073 44002084 FLI1 JASPAR yes 101815499
chr6 44002074 44002084 ERF JASPAR yes 70368136
chr6 44002074 44002084 ERG JASPAR yes 70368137
chr6 44002074 44002084 ETS1 JASPAR yes 70368138
chr6 44002074 44002084 ERF JASPAR yes 101815500
chr6 44002074 44002084 ERG JASPAR yes 101815501
chr6 44002074 44002084 ETS1 JASPAR yes 101815502
chr6 44002079 44002087 MEIS3 JASPAR yes 70368139
chr6 44002079 44002087 MEIS3 JASPAR yes 101815503
chr6 44002080 44002084 NFE TRANSFAC yes 70368140
chr6 44002080 44002084 NFE TRANSFAC yes 101815504
chr6 44002130 44002135 SP1 TRANSFAC yes 70368141
chr6 44002130 44002135 SP1 TRANSFAC yes 101815505
chr6 44002134 44002146 HNF1B JASPAR yes 70368142
chr6 44002134 44002146 HNF1B JASPAR yes 101815506
chr6 44002137 44002150 DUXA JASPAR yes 70368143
chr6 44002137 44002150 DUXA JASPAR yes 101815507
chr6 44002138 44002149 BATF JASPAR yes 70368144
chr6 44002138 44002149 DUX4 JASPAR yes 70368145
chr6 44002138 44002149 BATF JASPAR yes 101815508
chr6 44002138 44002149 DUX4 JASPAR yes 101815509
chr6 44002139 44002150 FOSL2 JASPAR yes 70368146
chr6 44002139 44002150 FOSL2 JASPAR yes 101815510
chr6 44002140 44002151 FOSL1 JASPAR yes 70368147
chr6 44002140 44002151 FOSL1 JASPAR yes 101815511
chr6 44002155 44002174 CTCF JASPAR yes 70368148
chr6 44002155 44002174 CTCF JASPAR yes 101815512
chr6 44002181 44002196 TFAP2C JASPAR yes 70368149
chr6 44002181 44002196 TFAP2C JASPAR yes 101815513
chr6 44002183 44002188 ETS2 TRANSFAC yes 70368150
chr6 44002183 44002188 ETS2 TRANSFAC yes 101815514
chr6 44002183 44002198 TFAP2A JASPAR yes 70368151
chr6 44002183 44002198 TFAP2A JASPAR yes 101815515
chr6 44002190 44002200 TBX21 JASPAR yes 70368152
chr6 44002190 44002200 TBX21 JASPAR yes 101815516
chr6 44002190 44002201 TBX20 JASPAR yes 70368153
chr6 44002190 44002201 TBX2 JASPAR yes 70368154
chr6 44002190 44002201 TBX20 JASPAR yes 101815517
chr6 44002190 44002201 TBX2 JASPAR yes 101815518
chr6 44002190 44002203 EOMES JASPAR yes 70368155
chr6 44002190 44002203 EOMES JASPAR yes 101815519
chr6 44002191 44002199 MGA JASPAR yes 70368156
chr6 44002191 44002199 TBX15 JASPAR yes 70368157
chr6 44002191 44002199 TBX1 JASPAR yes 70368158
chr6 44002191 44002199 TBX4 JASPAR yes 70368159
chr6 44002191 44002199 TBX5 JASPAR yes 70368160
chr6 44002191 44002199 MGA JASPAR yes 101815520
chr6 44002191 44002199 TBX15 JASPAR yes 101815521
chr6 44002191 44002199 TBX1 JASPAR yes 101815522
chr6 44002191 44002199 TBX4 JASPAR yes 101815523
chr6 44002191 44002199 TBX5 JASPAR yes 101815524
chr6 44002191 44002201 TBR1 JASPAR yes 70368161
chr6 44002191 44002201 TBR1 JASPAR yes 101815525
chr6 44002195 44002216 REST JASPAR yes 70368162
chr6 44002195 44002216 REST JASPAR yes 101815526
chr6 44002205 44002218 SMAD2 JASPAR yes 70368163
chr6 44002205 44002218 SMAD2 JASPAR yes 101815527
chr6 44002205 44002226 ZNF263 JASPAR yes 70368164
chr6 44002205 44002226 ZNF263 JASPAR yes 101815528
chr6 44002207 44002228 ZNF263 JASPAR yes 70368165
chr6 44002207 44002228 ZNF263 JASPAR yes 101815529
chr6 44002210 44002231 ZNF263 JASPAR yes 70368166
chr6 44002210 44002231 ZNF263 JASPAR yes 101815530
chr6 44002217 44002227 SP1 JASPAR yes 70368167
chr6 44002217 44002227 SP1 JASPAR yes 101815531
chr6 44002218 44002223 ETS2 TRANSFAC yes 70368168
chr6 44002218 44002223 ETS2 TRANSFAC yes 101815532
chr6 44002218 44002230 INSM1 JASPAR yes 70368169
chr6 44002218 44002230 INSM1 JASPAR yes 101815533
chr6 44002222 44002235 NFKB2 JASPAR yes 70368170
chr6 44002222 44002235 NFKB2 JASPAR yes 101815534
chr6 44002230 44002240 SP1 JASPAR yes 70368171
chr6 44002230 44002240 SP1 JASPAR yes 101815535
chr6 44002239 44002252 NR2F1 JASPAR yes 70368172
chr6 44002239 44002252 NR2F1 JASPAR yes 101815536
chr6 44002241 44002255 RXRB JASPAR yes 70368173
chr6 44002241 44002255 RXRG JASPAR yes 70368174
chr6 44002241 44002255 RXRB JASPAR yes 101815537
chr6 44002241 44002255 RXRG JASPAR yes 101815538
chr6 44002243 44002247 ESR1 TRANSFAC yes 70368175
chr6 44002243 44002247 ESR1 TRANSFAC yes 101815539
chr6 44002261 44002272 SPDEF JASPAR yes 70368176
chr6 44002261 44002272 SPDEF JASPAR yes 101815540
chr6 44002265 44002279 GLIS2 JASPAR yes 70368177
chr6 44002265 44002279 GLIS2 JASPAR yes 101815541
chr6 44002292 44002305 ATF4 JASPAR yes 70368178
chr6 44002292 44002305 ATF4 JASPAR yes 101815542
chr6 44002293 44002304 CEBPA JASPAR yes 70368179
chr6 44002293 44002304 CEBPA JASPAR yes 101815543
chr6 44002294 44002307 SCRT2 JASPAR yes 70368180
chr6 44002294 44002307 SCRT2 JASPAR yes 101815544
chr6 44002296 44002308 TAL1 JASPAR yes 70368181
chr6 44002296 44002308 TAL1 JASPAR yes 101815545
chr6 44002297 44002310 ZBTB18 JASPAR yes 70368182
chr6 44002297 44002310 ZBTB18 JASPAR yes 101815546
chr6 44002298 44002308 MSC JASPAR yes 70368183
chr6 44002298 44002308 MYF6 JASPAR yes 70368184
chr6 44002298 44002308 TFAP4 JASPAR yes 70368185
chr6 44002298 44002308 MSC JASPAR yes 101815547
chr6 44002298 44002308 MYF6 JASPAR yes 101815548
chr6 44002298 44002308 TFAP4 JASPAR yes 101815549
chr6 44002298 44002310 TAL1 JASPAR yes 70368186
chr6 44002298 44002310 TAL1 JASPAR yes 101815550
chr6 44002309 44002329 RREB1 JASPAR yes 70368187
chr6 44002309 44002329 RREB1 JASPAR yes 101815551
chr6 44002311 44002326 RUNX2 JASPAR yes 70368188
chr6 44002311 44002326 RUNX2 JASPAR yes 101815552
chr6 44002313 44002333 RREB1 JASPAR yes 70368189
chr6 44002313 44002333 RREB1 JASPAR yes 101815553
chr6 44002328 44002332 LFA1 TRANSFAC yes 70368190
chr6 44002328 44002332 LFA1 TRANSFAC yes 101815554
chr6 44002329 44002343 ZIC1 JASPAR yes 70368191
chr6 44002329 44002343 ZIC1 JASPAR yes 101815555
chr6 44002329 44002344 ZIC4 JASPAR yes 70368192
chr6 44002329 44002344 ZIC4 JASPAR yes 101815556
chr6 44002344 44002354 SP1 JASPAR yes 70368193
chr6 44002344 44002354 SP1 JASPAR yes 101815557
chr6 44002344 44002365 ZNF263 JASPAR yes 70368194
chr6 44002344 44002365 ZNF263 JASPAR yes 101815558
chr6 44002345 44002352 CEBPA TRANSFAC yes 70368195
chr6 44002345 44002352 CEBPA TRANSFAC yes 101815559
chr6 44002347 44002357 MZF1 JASPAR yes 70368196
chr6 44002347 44002357 MZF1 JASPAR yes 101815560
chr6 44002351 44002356 ETS2 TRANSFAC yes 70368197
chr6 44002351 44002356 ETS2 TRANSFAC yes 101815561
chr6 44002353 44002369 ZNF143 JASPAR yes 70368198
chr6 44002353 44002369 ZNF143 JASPAR yes 101815562
chr6 44002357 44002372 STAT1 JASPAR yes 70368199
chr6 44002357 44002372 STAT1 JASPAR yes 101815563
chr6 44002358 44002370 E2F8 JASPAR yes 70368200
chr6 44002358 44002370 E2F8 JASPAR yes 101815564
chr6 44002375 44002381 NFIC JASPAR yes 70368201
chr6 44002375 44002381 NFIC JASPAR yes 101815565
chr6 44002375 44002390 MEF2C JASPAR yes 70368202
chr6 44002375 44002390 MEF2C JASPAR yes 101815566
chr6 44002376 44002391 MEF2A JASPAR yes 70368203
chr6 44002376 44002391 MEF2A JASPAR yes 101815567
SNP sites on vista52037[chr6:44002049-44002379]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 44002077 rs1922985 C T
ERF ERG ETS1 FLI1 ZNF263
9041908
chr6 44002279 rs572578785 G A
GLIS2
9041909
chr6 44002338 rs73736924 G A
ZIC1 ZIC4
9041910
chr6 44002373 rs9369440 C A,T
TFAP2C
9041911
Genes possibly regulated by vista52037[chr6:44002049-44002379]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 43968317 43973695 + C6orf223 ENSG00000181577.11 43968317 0.93 1.0 6626 66268
chr6 44081194 44095194 - MRPL14 ENSG00000180992.5 44095194 0.74 0.99 6627 7185
chr6 44094651 44123256 + TMEM63B ENSG00000137216.14 44094651 0.81 1.0 6628 7728
Expression level of Genes
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miRNAs possibly regulated by vista52037[chr6:44002049-44002379]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results