EnhancerDB
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  3. vista52048[chr6:44022822-44022968]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52048[chr6:44022822-44022968]
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Tissue distribution of vista52048
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Transcription factor that possibly regulate vista52048[chr6:44022822-44022968]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 44022719 44023341 TFAP2C UCSC Txn Factor no Conserved 108540381
chr6 44022720 44023348 TFAP2A UCSC Txn Factor no Conserved 108540382
chr6 44022828 44022840 NHLH1 JASPAR yes 70368718
chr6 44022828 44022840 NHLH1 JASPAR yes 101818244
chr6 44022858 44022863 ETS2 TRANSFAC yes 70368719
chr6 44022858 44022863 ETS2 TRANSFAC yes 101818245
chr6 44022864 44022869 SP1 TRANSFAC yes 70368720
chr6 44022864 44022869 SP1 TRANSFAC yes 101818246
chr6 44022867 44022871 LFA1 TRANSFAC yes 70368721
chr6 44022867 44022871 LFA1 TRANSFAC yes 101818247
chr6 44022893 44022906 TFAP2A JASPAR yes 70368722
chr6 44022893 44022906 TFAP2B JASPAR yes 70368723
chr6 44022893 44022906 TFAP2C JASPAR yes 70368724
chr6 44022893 44022906 TFAP2A JASPAR yes 101818248
chr6 44022893 44022906 TFAP2B JASPAR yes 101818249
chr6 44022893 44022906 TFAP2C JASPAR yes 101818250
chr6 44022911 44022916 SP1 TRANSFAC yes 70368725
chr6 44022911 44022916 SP1 TRANSFAC yes 101818251
chr6 44022921 44022932 E2F4 JASPAR yes 70368726
chr6 44022921 44022932 E2F6 JASPAR yes 70368727
chr6 44022921 44022932 E2F4 JASPAR yes 101818252
chr6 44022921 44022932 E2F6 JASPAR yes 101818253
chr6 44022921 44022935 E2F7 JASPAR yes 70368728
chr6 44022921 44022935 E2F7 JASPAR yes 101818254
chr6 44022922 44022933 E2F1 JASPAR yes 70368729
chr6 44022922 44022933 E2F1 JASPAR yes 101818255
chr6 44022922 44022934 E2F8 JASPAR yes 70368730
chr6 44022922 44022934 E2F8 JASPAR yes 101818256
chr6 44022930 44022949 PAX5 JASPAR yes 70368731
chr6 44022930 44022949 PAX5 JASPAR yes 101818257
chr6 44022939 44022953 JUN JASPAR yes 70368732
chr6 44022939 44022953 JUN JASPAR yes 101818258
chr6 44022943 44022954 FOS JASPAR yes 70368733
chr6 44022943 44022954 FOSL1 JASPAR yes 70368734
chr6 44022943 44022954 JUND JASPAR yes 70368735
chr6 44022943 44022954 FOS JASPAR yes 101818259
chr6 44022943 44022954 FOSL1 JASPAR yes 101818260
chr6 44022943 44022954 JUND JASPAR yes 101818261
chr6 44022945 44022956 BATF JASPAR yes 70368736
chr6 44022945 44022956 BATF JASPAR yes 101818262
chr6 44022951 44022957 GATA3 JASPAR yes 70368737
chr6 44022951 44022957 GATA3 JASPAR yes 101818263
chr6 44022957 44022965 SP1 TRANSFAC yes 70368738
chr6 44022957 44022965 SP1 TRANSFAC yes 101818264
chr6 44022962 44022976 PLAG1 JASPAR yes 70368739
chr6 44022962 44022976 PLAG1 JASPAR yes 101818265
chr6 44022964 44022983 REST JASPAR yes 70368740
chr6 44022964 44022983 REST JASPAR yes 101818266
SNP sites on vista52048[chr6:44022822-44022968]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 44022864 rs184482818 G A
SP1 TFAP2A TFAP2C
9042211
chr6 44022931 rs9472204 C T
E2F1 E2F4 E2F6 E2F7 E2F8 PAX5 TFAP2A TFAP2C
9042212
Genes possibly regulated by vista52048[chr6:44022822-44022968]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 43968317 43973695 + C6orf223 ENSG00000181577.11 43968317 0.93 1.0 6626 45495
chr6 44081194 44095194 - MRPL14 ENSG00000180992.5 44095194 0.74 0.99 6627 27774
chr6 44094651 44123256 + TMEM63B ENSG00000137216.14 44094651 0.81 1.0 6628 28317
Expression level of Genes
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miRNAs possibly regulated by vista52048[chr6:44022822-44022968]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results