EnhancerDB
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  3. vista52072[chr6:44190356-44190650]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52072[chr6:44190356-44190650]
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Tissue distribution of vista52072
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Transcription factor that possibly regulate vista52072[chr6:44190356-44190650]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 44190349 44190362 NFKB1 JASPAR yes 70370029
chr6 44190349 44190362 NFKB2 JASPAR yes 70370030
chr6 44190349 44190362 NFKB1 JASPAR yes 101831367
chr6 44190349 44190362 NFKB2 JASPAR yes 101831368
chr6 44190350 44190361 NFKB1 JASPAR yes 70370031
chr6 44190350 44190361 NFKB1 JASPAR yes 101831369
chr6 44190358 44190378 RREB1 JASPAR yes 70370032
chr6 44190358 44190378 RREB1 JASPAR yes 101831370
chr6 44190359 44190379 RREB1 JASPAR yes 70370033
chr6 44190359 44190379 RREB1 JASPAR yes 101831371
chr6 44190363 44190373 SP1 JASPAR yes 70370034
chr6 44190363 44190373 SP1 JASPAR yes 101831372
chr6 44190371 44190383 SRF JASPAR yes 70370035
chr6 44190371 44190383 SRF JASPAR yes 101831373
chr6 44190372 44190376 YY1 TRANSFAC yes 70370036
chr6 44190372 44190376 YY1 TRANSFAC yes 101831374
chr6 44190372 44190383 HOXA10 JASPAR yes 70370037
chr6 44190372 44190383 HOXA10 JASPAR yes 101831375
chr6 44190373 44190382 CDX1 JASPAR yes 70370038
chr6 44190373 44190382 CDX1 JASPAR yes 101831376
chr6 44190373 44190384 CDX2 JASPAR yes 70370039
chr6 44190373 44190384 CDX2 JASPAR yes 101831377
chr6 44190379 44190400 REST JASPAR yes 70370040
chr6 44190379 44190400 REST JASPAR yes 101831378
chr6 44190382 44190400 NFYA JASPAR yes 70370041
chr6 44190382 44190400 NFYA JASPAR yes 101831379
chr6 44190397 44190408 E2F6 JASPAR yes 70370042
chr6 44190397 44190408 E2F6 JASPAR yes 101831380
chr6 44190400 44190410 SP1 JASPAR yes 70370043
chr6 44190400 44190410 SP1 JASPAR yes 101831381
chr6 44190403 44190413 MZF1 JASPAR yes 70370044
chr6 44190403 44190413 MZF1 JASPAR yes 101831382
chr6 44190406 44190412 SP1 TRANSFAC yes 70370045
chr6 44190406 44190412 SP1 TRANSFAC yes 101831383
chr6 44190410 44190423 TFAP2B JASPAR yes 70370046
chr6 44190410 44190423 TFAP2C JASPAR yes 70370047
chr6 44190410 44190423 TFAP2B JASPAR yes 101831384
chr6 44190410 44190423 TFAP2C JASPAR yes 101831385
chr6 44190444 44190449 SP1 TRANSFAC yes 70370048
chr6 44190444 44190449 SP1 TRANSFAC yes 101831386
chr6 44190444 44190465 ZNF263 JASPAR yes 70370049
chr6 44190444 44190465 ZNF263 JASPAR yes 101831387
chr6 44190448 44190456 TBX5 JASPAR yes 70370050
chr6 44190448 44190456 TBX5 JASPAR yes 101831388
chr6 44190453 44190461 EHF JASPAR yes 70370051
chr6 44190453 44190461 EHF JASPAR yes 101831389
chr6 44190491 44190497 ETS1 JASPAR yes 70370052
chr6 44190491 44190497 SPI1 JASPAR yes 70370053
chr6 44190491 44190497 ETS1 JASPAR yes 101831390
chr6 44190491 44190497 SPI1 JASPAR yes 101831391
chr6 44190498 44190502 NFE TRANSFAC yes 70370054
chr6 44190498 44190502 NFE TRANSFAC yes 101831392
chr6 44190502 44190514 YY1 JASPAR yes 70370055
chr6 44190502 44190514 YY1 JASPAR yes 101831393
chr6 44190505 44190511 YY1 JASPAR yes 70370056
chr6 44190505 44190511 YY1 JASPAR yes 101831394
chr6 44190532 44190537 GATA2 JASPAR yes 70370057
chr6 44190532 44190537 GATA2 JASPAR yes 101831395
chr6 44190535 44190539 TEAD2 TRANSFAC yes 70370058
chr6 44190535 44190539 TEAD2 TRANSFAC yes 101831396
chr6 44190545 44190560 HSF1 JASPAR yes 70370059
chr6 44190545 44190560 HSF1 JASPAR yes 101831397
chr6 44190549 44190570 IRF1 JASPAR yes 70370060
chr6 44190549 44190570 IRF1 JASPAR yes 101831398
chr6 44190568 44190576 TBX15 JASPAR yes 70370061
chr6 44190568 44190576 TBX15 JASPAR yes 101831399
chr6 44190568 44190577 ZEB1 JASPAR yes 70370062
chr6 44190568 44190577 ZEB1 JASPAR yes 101831400
chr6 44190568 44190583 SCRT1 JASPAR yes 70370063
chr6 44190568 44190583 SCRT1 JASPAR yes 101831401
chr6 44190569 44190579 FIGLA JASPAR yes 70370064
chr6 44190569 44190579 TCF3 JASPAR yes 70370065
chr6 44190569 44190579 TCF4 JASPAR yes 70370066
chr6 44190569 44190579 FIGLA JASPAR yes 101831402
chr6 44190569 44190579 TCF3 JASPAR yes 101831403
chr6 44190569 44190579 TCF4 JASPAR yes 101831404
chr6 44190570 44190579 SNAI2 JASPAR yes 70370067
chr6 44190570 44190579 SNAI2 JASPAR yes 101831405
chr6 44190571 44190576 USF2 TRANSFAC yes 70370068
chr6 44190571 44190576 USF2 TRANSFAC yes 101831406
chr6 44190581 44190602 REST JASPAR yes 70370069
chr6 44190581 44190602 REST JASPAR yes 101831407
chr6 44190585 44190592 NFATC2 JASPAR yes 70370070
chr6 44190585 44190592 NFATC2 JASPAR yes 101831408
chr6 44190640 44190649 SP1 TRANSFAC yes 70370071
chr6 44190640 44190649 SP1 TRANSFAC yes 101831409
chr6 44190641 44190651 SP1 JASPAR yes 70370072
chr6 44190641 44190651 SP1 TRANSFAC yes 70370073
chr6 44190641 44190651 SP1 JASPAR yes 101831410
chr6 44190641 44190651 SP1 TRANSFAC yes 101831411
chr6 44190642 44190652 SP1 JASPAR yes 70370074
chr6 44190642 44190652 SP1 JASPAR yes 101831412
chr6 44190644 44190654 ZNF740 JASPAR yes 70370075
chr6 44190644 44190654 ZNF740 JASPAR yes 101831413
chr6 44190644 44190658 GLIS2 JASPAR yes 70370076
chr6 44190644 44190658 GLIS3 JASPAR yes 70370077
chr6 44190644 44190658 GLIS2 JASPAR yes 101831414
chr6 44190644 44190658 GLIS3 JASPAR yes 101831415
chr6 44190644 44190659 ZIC3 JASPAR yes 70370078
chr6 44190644 44190659 ZIC4 JASPAR yes 70370079
chr6 44190644 44190659 ZIC3 JASPAR yes 101831416
chr6 44190644 44190659 ZIC4 JASPAR yes 101831417
chr6 44190648 44190654 SP1 TRANSFAC yes 70370080
chr6 44190648 44190654 SP1 TRANSFAC yes 101831418
SNP sites on vista52072[chr6:44190356-44190650]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 44190500 rs370442491 T A,C
NFE
9043443
Genes possibly regulated by vista52072[chr6:44190356-44190650]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 44081194 44095194 - MRPL14 ENSG00000180992.5 44095194 0.74 0.99 6627 4838
chr6 44094651 44123256 + TMEM63B ENSG00000137216.14 44094651 0.81 1.0 6628 4295
chr6 44126548 44152139 + CAPN11 ENSG00000137225.8 44126548 0.96 0.96 6629 36192
chr6 44187242 44201888 + SLC29A1 ENSG00000112759.12 44187242 0.77 1.0 6630 96886
chr6 44214824 44221620 + HSP90AB1 ENSG00000096384.15 44214824 0.73 1.0 6631 75826
chr6 44221833 44225291 - SLC35B2 ENSG00000157593.12 44225291 0.64 0.99 6632 65359
chr6 44225903 44233500 - NFKBIE ENSG00000146232.10 44233500 0.82 1.0 6633 57150
chr6 44238203 44275243 + TMEM151B ENSG00000178233.13 44238203 0.85 1.0 6634 52447
chr6 44240931 44346694 + RP11-444E17.6 ENSG00000272442.2 44240931 0.95 1.0 6635 49719
chr6 44246480 44265458 - TCTE1 ENSG00000146221.8 44265458 0.9 1.0 6636 25192
chr6 44267391 44281063 - AARS2 ENSG00000124608.4 44281063 0.61 0.99 6637 9587
Expression level of Genes
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miRNAs possibly regulated by vista52072[chr6:44190356-44190650]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results