EnhancerDB
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  3. vista52080[chr6:44443307-44443732]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52080[chr6:44443307-44443732]
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Tissue distribution of vista52080
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Transcription factor that possibly regulate vista52080[chr6:44443307-44443732]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 44443418 44443809 CTCF UCSC Txn Factor no Conserved 108540442
chr6 44443475 44443751 SMC3 UCSC Txn Factor no Conserved 108540443
chr6 44443485 44443751 RAD21 UCSC Txn Factor no Conserved 108540444
chr6 44443317 44443334 BCL6B JASPAR yes 70370455
chr6 44443317 44443334 BCL6B JASPAR yes 101838495
chr6 44443319 44443323 NFE TRANSFAC yes 70370456
chr6 44443319 44443323 NFE TRANSFAC yes 101838496
chr6 44443361 44443366 SP1 TRANSFAC yes 70370457
chr6 44443361 44443366 SP1 TRANSFAC yes 101838497
chr6 44443383 44443398 HNF4G JASPAR yes 70370458
chr6 44443383 44443398 HNF4G JASPAR yes 101838498
chr6 44443384 44443398 NR2F1 JASPAR yes 70370459
chr6 44443384 44443398 NR2F1 JASPAR yes 101838499
chr6 44443384 44443399 HNF4A JASPAR yes 70370460
chr6 44443384 44443399 HNF4A JASPAR yes 101838500
chr6 44443394 44443404 NKX2-3 JASPAR yes 70370461
chr6 44443394 44443404 NKX2-3 JASPAR yes 101838501
chr6 44443395 44443416 ZNF263 JASPAR yes 70370462
chr6 44443395 44443416 ZNF263 JASPAR yes 101838502
chr6 44443406 44443412 SP1 TRANSFAC yes 70370463
chr6 44443406 44443412 SP1 TRANSFAC yes 101838503
chr6 44443406 44443416 SP1 JASPAR yes 70370464
chr6 44443406 44443416 SP1 JASPAR yes 101838504
chr6 44443408 44443422 EBF1 JASPAR yes 70370465
chr6 44443408 44443422 EBF1 JASPAR yes 101838505
chr6 44443409 44443420 EBF1 JASPAR yes 70370466
chr6 44443409 44443420 EBF1 JASPAR yes 101838506
chr6 44443410 44443416 MZF1 JASPAR yes 70370467
chr6 44443410 44443416 MZF1 JASPAR yes 101838507
chr6 44443433 44443448 HSF1 JASPAR yes 70370468
chr6 44443433 44443448 HSF1 JASPAR yes 101838508
chr6 44443460 44443464 NFE TRANSFAC yes 70370469
chr6 44443460 44443464 NFE TRANSFAC yes 101838509
chr6 44443473 44443478 SP1 TRANSFAC yes 70370470
chr6 44443473 44443478 SP1 TRANSFAC yes 101838510
chr6 44443473 44443488 TFAP2A JASPAR yes 70370471
chr6 44443473 44443488 TFAP2C JASPAR yes 70370472
chr6 44443473 44443488 TFAP2A JASPAR yes 101838511
chr6 44443473 44443488 TFAP2C JASPAR yes 101838512
chr6 44443475 44443488 TFAP2A JASPAR yes 70370473
chr6 44443475 44443488 TFAP2B JASPAR yes 70370474
chr6 44443475 44443488 TFAP2C JASPAR yes 70370475
chr6 44443475 44443488 TFAP2A JASPAR yes 101838513
chr6 44443475 44443488 TFAP2B JASPAR yes 101838514
chr6 44443475 44443488 TFAP2C JASPAR yes 101838515
chr6 44443476 44443487 EBF1 JASPAR yes 70370476
chr6 44443476 44443487 EBF1 JASPAR yes 101838516
chr6 44443476 44443488 TFAP2A JASPAR yes 70370477
chr6 44443476 44443488 TFAP2B JASPAR yes 70370478
chr6 44443476 44443488 TFAP2C JASPAR yes 70370479
chr6 44443476 44443488 TFAP2A JASPAR yes 101838517
chr6 44443476 44443488 TFAP2B JASPAR yes 101838518
chr6 44443476 44443488 TFAP2C JASPAR yes 101838519
chr6 44443478 44443487 TFAP2A JASPAR yes 70370480
chr6 44443478 44443487 TFAP2A JASPAR yes 101838520
chr6 44443528 44443532 H4TF2 TRANSFAC yes 70370481
chr6 44443528 44443532 H4TF2 TRANSFAC yes 101838521
chr6 44443540 44443545 ETS2 TRANSFAC yes 70370482
chr6 44443540 44443545 ETS2 TRANSFAC yes 101838522
chr6 44443580 44443595 HNF4A JASPAR yes 70370483
chr6 44443580 44443595 HNF4A JASPAR yes 101838523
chr6 44443588 44443605 RXRA JASPAR yes 70370484
chr6 44443588 44443605 RXRA JASPAR yes 101838524
chr6 44443590 44443600 ETV1 JASPAR yes 70370485
chr6 44443590 44443600 ETV4 JASPAR yes 70370486
chr6 44443590 44443600 ETV5 JASPAR yes 70370487
chr6 44443590 44443600 ETV1 JASPAR yes 101838525
chr6 44443590 44443600 ETV4 JASPAR yes 101838526
chr6 44443590 44443600 ETV5 JASPAR yes 101838527
chr6 44443599 44443618 CTCF JASPAR yes 70370488
chr6 44443599 44443618 CTCF JASPAR yes 101838528
chr6 44443604 44443613 SNAI2 JASPAR yes 70370489
chr6 44443604 44443613 SNAI2 JASPAR yes 101838529
chr6 44443604 44443614 ID4 JASPAR yes 70370490
chr6 44443604 44443614 MSC JASPAR yes 70370491
chr6 44443604 44443614 TCF3 JASPAR yes 70370492
chr6 44443604 44443614 TCF4 JASPAR yes 70370493
chr6 44443604 44443614 ID4 JASPAR yes 101838530
chr6 44443604 44443614 MSC JASPAR yes 101838531
chr6 44443604 44443614 TCF3 JASPAR yes 101838532
chr6 44443604 44443614 TCF4 JASPAR yes 101838533
chr6 44443607 44443615 TBX15 JASPAR yes 70370494
chr6 44443607 44443615 TBX1 JASPAR yes 70370495
chr6 44443607 44443615 TBX4 JASPAR yes 70370496
chr6 44443607 44443615 TBX5 JASPAR yes 70370497
chr6 44443607 44443615 TBX15 JASPAR yes 101838534
chr6 44443607 44443615 TBX1 JASPAR yes 101838535
chr6 44443607 44443615 TBX4 JASPAR yes 101838536
chr6 44443607 44443615 TBX5 JASPAR yes 101838537
chr6 44443618 44443624 NFE2 TRANSFAC yes 70370498
chr6 44443618 44443624 NFE2 TRANSFAC yes 101838538
chr6 44443619 44443630 EBF1 JASPAR yes 70370499
chr6 44443619 44443630 EBF1 JASPAR yes 101838539
chr6 44443644 44443657 ZBED1 JASPAR yes 70370500
chr6 44443644 44443657 ZBED1 JASPAR yes 101838540
chr6 44443675 44443681 LEF1 TRANSFAC yes 70370501
chr6 44443675 44443681 SOX10 JASPAR yes 70370502
chr6 44443675 44443681 LEF1 TRANSFAC yes 101838541
chr6 44443675 44443681 SOX10 JASPAR yes 101838542
chr6 44443680 44443699 PAX5 JASPAR yes 70370503
chr6 44443680 44443699 PAX5 JASPAR yes 101838543
chr6 44443720 44443731 FOXP2 JASPAR yes 70370504
chr6 44443720 44443731 FOXP2 JASPAR yes 101838544
chr6 44443720 44443734 FOXF2 JASPAR yes 70370505
chr6 44443720 44443734 FOXF2 JASPAR yes 101838545
chr6 44443721 44443729 FOXD1 JASPAR yes 70370506
chr6 44443721 44443729 FOXO3 JASPAR yes 70370507
chr6 44443721 44443729 FOXD1 JASPAR yes 101838546
chr6 44443721 44443729 FOXO3 JASPAR yes 101838547
chr6 44443722 44443729 FOXD2 JASPAR yes 70370508
chr6 44443722 44443729 FOXI1 JASPAR yes 70370509
chr6 44443722 44443729 FOXL1 JASPAR yes 70370510
chr6 44443722 44443729 FOXO4 JASPAR yes 70370511
chr6 44443722 44443729 FOXO6 JASPAR yes 70370512
chr6 44443722 44443729 FOXP3 JASPAR yes 70370513
chr6 44443722 44443729 FOXD2 JASPAR yes 101838548
chr6 44443722 44443729 FOXI1 JASPAR yes 101838549
chr6 44443722 44443729 FOXL1 JASPAR yes 101838550
chr6 44443722 44443729 FOXO4 JASPAR yes 101838551
chr6 44443722 44443729 FOXO6 JASPAR yes 101838552
chr6 44443722 44443729 FOXP3 JASPAR yes 101838553
chr6 44443722 44443730 FOXO3 JASPAR yes 70370514
chr6 44443722 44443730 FOXO3 JASPAR yes 101838554
SNP sites on vista52080[chr6:44443307-44443732]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 44443362 rs9395025 G A
SP1
9044476
chr6 44443519 rs113929702 C T
CTCF RAD21 SMC3
9044477
chr6 44443520 rs9296434 G A
CTCF RAD21 SMC3
9044478
chr6 44443642 rs4714792 G C,T
CTCF RAD21 SMC3
9044479
chr6 44443643 rs374331166 G A
CTCF RAD21 SMC3
9044480
Genes possibly regulated by vista52080[chr6:44443307-44443732]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 44355262 44418163 + CDC5L ENSG00000096401.7 44355262 0.62 0.99 6639 11955
chr6 44400472 44400720 - AL133262.1 ENSG00000267849.1 44400720 0.99 0.0 6640 57413
Expression level of Genes
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miRNAs possibly regulated by vista52080[chr6:44443307-44443732]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results