EnhancerDB
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  3. vista52088[chr6:44598266-44598445]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52088[chr6:44598266-44598445]
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Tissue distribution of vista52088
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Transcription factor that possibly regulate vista52088[chr6:44598266-44598445]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 44598133 44598758 CTCF UCSC Txn Factor no Conserved 108540450
chr6 44598203 44598484 SMC3 UCSC Txn Factor no Conserved 108540451
chr6 44598212 44598499 RAD21 UCSC Txn Factor no Conserved 108540452
chr6 44598251 44598271 PPARG JASPAR yes 70370753
chr6 44598251 44598271 PPARG JASPAR yes 101849929
chr6 44598262 44598273 EBF1 JASPAR yes 70370754
chr6 44598262 44598273 EBF1 JASPAR yes 101849930
chr6 44598263 44598269 MZF1 JASPAR yes 70370755
chr6 44598263 44598269 MZF1 JASPAR yes 101849931
chr6 44598298 44598313 HSF1 JASPAR yes 70370756
chr6 44598298 44598313 HSF1 JASPAR yes 101849932
chr6 44598331 44598350 CTCF JASPAR yes 70370757
chr6 44598331 44598350 CTCF JASPAR yes 101849933
chr6 44598337 44598349 YY1 JASPAR yes 70370758
chr6 44598337 44598349 YY1 JASPAR yes 101849934
chr6 44598340 44598346 YY1 JASPAR yes 70370759
chr6 44598340 44598346 YY1 JASPAR yes 101849935
chr6 44598353 44598359 LEF1 TRANSFAC yes 70370760
chr6 44598353 44598359 SOX10 JASPAR yes 70370761
chr6 44598353 44598359 LEF1 TRANSFAC yes 101849936
chr6 44598353 44598359 SOX10 JASPAR yes 101849937
chr6 44598362 44598373 TFAP2A JASPAR yes 70370762
chr6 44598362 44598373 TFAP2C JASPAR yes 70370763
chr6 44598362 44598373 TFAP2A JASPAR yes 101849938
chr6 44598362 44598373 TFAP2C JASPAR yes 101849939
chr6 44598374 44598379 SP1 TRANSFAC yes 70370764
chr6 44598374 44598379 SP1 TRANSFAC yes 101849940
chr6 44598375 44598380 SP1 TRANSFAC yes 70370765
chr6 44598375 44598380 SP1 TRANSFAC yes 101849941
chr6 44598375 44598381 SP1 TRANSFAC yes 70370766
chr6 44598375 44598381 SP1 TRANSFAC yes 101849942
chr6 44598379 44598384 SP1 TRANSFAC yes 70370767
chr6 44598379 44598384 SP1 TRANSFAC yes 101849943
chr6 44598379 44598386 SP1 TRANSFAC yes 70370768
chr6 44598379 44598386 SP1 TRANSFAC yes 101849944
chr6 44598379 44598389 SP1 JASPAR yes 70370769
chr6 44598379 44598389 SP1 JASPAR yes 101849945
chr6 44598386 44598391 SP1 TRANSFAC yes 70370770
chr6 44598386 44598391 SP1 TRANSFAC yes 101849946
chr6 44598387 44598392 SP1 TRANSFAC yes 70370771
chr6 44598387 44598392 SP1 TRANSFAC yes 101849947
chr6 44598391 44598395 H4TF2 TRANSFAC yes 70370772
chr6 44598391 44598395 H4TF2 TRANSFAC yes 101849948
chr6 44598405 44598411 PEA3 TRANSFAC yes 70370773
chr6 44598405 44598411 PEA3 TRANSFAC yes 101849949
SNP sites on vista52088[chr6:44598266-44598445]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 44598389 rs191405499 G A
CTCF RAD21 SMC3 SP1
9045794
Genes possibly regulated by vista52088[chr6:44598266-44598445]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista52088[chr6:44598266-44598445]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results