EnhancerDB
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  3. vista52094[chr6:44628128-44628418]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52094[chr6:44628128-44628418]
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Tissue distribution of vista52094
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Transcription factor that possibly regulate vista52094[chr6:44628128-44628418]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 44628118 44628138 RREB1 JASPAR yes 70370987
chr6 44628118 44628138 RREB1 JASPAR yes 101852732
chr6 44628146 44628152 ZNF354C JASPAR yes 70370988
chr6 44628146 44628152 ZNF354C JASPAR yes 101852733
chr6 44628160 44628164 ESR1 TRANSFAC yes 70370989
chr6 44628160 44628164 ESR1 TRANSFAC yes 101852734
chr6 44628197 44628202 MYB TRANSFAC yes 70370990
chr6 44628197 44628202 MYB TRANSFAC yes 101852735
chr6 44628237 44628241 YY1 TRANSFAC yes 70370991
chr6 44628237 44628241 YY1 TRANSFAC yes 101852736
chr6 44628245 44628257 PBX1 JASPAR yes 70370992
chr6 44628245 44628257 PBX1 JASPAR yes 101852737
chr6 44628323 44628333 ALX3 JASPAR yes 70370993
chr6 44628323 44628333 EN2 JASPAR yes 70370994
chr6 44628323 44628333 ESX1 JASPAR yes 70370995
chr6 44628323 44628333 GBX1 JASPAR yes 70370996
chr6 44628323 44628333 LBX2 JASPAR yes 70370997
chr6 44628323 44628333 LHX2 JASPAR yes 70370998
chr6 44628323 44628333 MIXL1 JASPAR yes 70370999
chr6 44628323 44628333 ALX3 JASPAR yes 101852738
chr6 44628323 44628333 EN2 JASPAR yes 101852739
chr6 44628323 44628333 ESX1 JASPAR yes 101852740
chr6 44628323 44628333 GBX1 JASPAR yes 101852741
chr6 44628323 44628333 LBX2 JASPAR yes 101852742
chr6 44628323 44628333 LHX2 JASPAR yes 101852743
chr6 44628323 44628333 MIXL1 JASPAR yes 101852744
chr6 44628324 44628332 LHX9 JASPAR yes 70371000
chr6 44628324 44628332 SHOX JASPAR yes 70371001
chr6 44628324 44628332 LHX9 JASPAR yes 101852745
chr6 44628324 44628332 SHOX JASPAR yes 101852746
chr6 44628338 44628342 NFE TRANSFAC yes 70371002
chr6 44628338 44628342 NFE TRANSFAC yes 101852747
chr6 44628380 44628388 HOXA5 JASPAR yes 70371003
chr6 44628380 44628388 HOXA5 JASPAR yes 101852748
chr6 44628388 44628405 PAX1 JASPAR yes 70371004
chr6 44628388 44628405 PAX9 JASPAR yes 70371005
chr6 44628388 44628405 PAX1 JASPAR yes 101852749
chr6 44628388 44628405 PAX9 JASPAR yes 101852750
chr6 44628391 44628403 PBX1 JASPAR yes 70371006
chr6 44628391 44628403 PBX1 JASPAR yes 101852751
SNP sites on vista52094[chr6:44628128-44628418]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 44628216 rs6458401 C T no 9046057
chr6 44628222 rs551444768 C T no 9046058
chr6 44628260 rs116274798 T G no 9046059
chr6 44628305 rs149170225 G A,T no 9046060
Genes possibly regulated by vista52094[chr6:44628128-44628418]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista52094[chr6:44628128-44628418]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results