EnhancerDB
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  3. vista52126[chr6:45299904-45300369]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52126[chr6:45299904-45300369]
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Tissue distribution of vista52126
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Transcription factor that possibly regulate vista52126[chr6:45299904-45300369]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 45299930 45299941 TBX20 JASPAR yes 70372687
chr6 45299933 45299954 IRF1 JASPAR yes 70372688
chr6 45299935 45299950 PRDM1 JASPAR yes 70372689
chr6 45299935 45299950 STAT2 JASPAR yes 70372690
chr6 45299946 45299962 POU4F3 JASPAR yes 70372691
chr6 45299948 45299960 FOXI1 JASPAR yes 70372692
chr6 45299966 45299977 NFKB1 JASPAR yes 70372693
chr6 45299967 45299978 NFKB1 JASPAR yes 70372694
chr6 45299972 45299982 MZF1 JASPAR yes 70372695
chr6 45299972 45299987 NR2C2 JASPAR yes 70372696
chr6 45299974 45299984 SP1 JASPAR yes 70372697
chr6 45299975 45299981 SP1 TRANSFAC yes 70372698
chr6 45299975 45299985 SP1 JASPAR yes 70372699
chr6 45299976 45299986 SP1 JASPAR yes 70372700
chr6 45299991 45300001 MSC JASPAR yes 70372701
chr6 45300009 45300020 RUNX1 JASPAR yes 70372702
chr6 45300017 45300032 MEF2C JASPAR yes 70372703
chr6 45300018 45300030 MEF2A JASPAR yes 70372704
chr6 45300019 45300030 FOXC1 JASPAR yes 70372705
chr6 45300020 45300024 YY1 TRANSFAC yes 70372706
chr6 45300026 45300042 SOX4 JASPAR yes 70372707
chr6 45300038 45300044 LEF1 TRANSFAC yes 70372708
chr6 45300038 45300044 SOX10 JASPAR yes 70372709
chr6 45300046 45300059 SCRT2 JASPAR yes 70372710
chr6 45300051 45300066 NR2C2 JASPAR yes 70372711
chr6 45300052 45300066 NR2F1 JASPAR yes 70372712
chr6 45300052 45300066 RXRB JASPAR yes 70372713
chr6 45300052 45300066 RXRG JASPAR yes 70372714
chr6 45300054 45300066 INSM1 JASPAR yes 70372715
chr6 45300083 45300091 FOXL1 JASPAR yes 70372716
chr6 45300083 45300094 FOXB1 JASPAR yes 70372717
chr6 45300085 45300093 FOXL1 JASPAR yes 70372718
chr6 45300091 45300095 YY1 TRANSFAC yes 70372719
chr6 45300095 45300101 TBP TRANSFAC yes 70372720
chr6 45300095 45300116 IRF1 JASPAR yes 70372721
chr6 45300099 45300114 PRDM1 JASPAR yes 70372722
chr6 45300102 45300107 ETS2 TRANSFAC yes 70372723
chr6 45300104 45300118 SPIC JASPAR yes 70372724
chr6 45300104 45300118 STAT1 JASPAR yes 70372725
chr6 45300104 45300119 STAT2 JASPAR yes 70372726
chr6 45300110 45300118 FOXC1 JASPAR yes 70372727
chr6 45300112 45300119 NKX3-1 JASPAR yes 70372728
chr6 45300133 45300137 H1TF2 TRANSFAC yes 70372729
chr6 45300133 45300137 NFE TRANSFAC yes 70372730
chr6 45300133 45300137 SRF TRANSFAC yes 70372731
chr6 45300145 45300157 FOXI1 JASPAR yes 70372732
chr6 45300145 45300160 FOXP1 JASPAR yes 70372733
chr6 45300146 45300158 FOXC2 JASPAR yes 70372734
chr6 45300146 45300160 FOXF2 JASPAR yes 70372735
chr6 45300146 45300160 ONECUT2 JASPAR yes 70372736
chr6 45300146 45300160 ONECUT3 JASPAR yes 70372737
chr6 45300147 45300158 FOXB1 JASPAR yes 70372738
chr6 45300147 45300158 FOXC1 JASPAR yes 70372739
chr6 45300148 45300152 YY1 TRANSFAC yes 70372740
chr6 45300148 45300163 MEF2A JASPAR yes 70372741
chr6 45300149 45300164 MEF2C JASPAR yes 70372742
chr6 45300152 45300156 YY1 TRANSFAC yes 70372743
chr6 45300152 45300165 POU2F2 JASPAR yes 70372744
chr6 45300160 45300164 YY1 TRANSFAC yes 70372745
chr6 45300164 45300180 POU4F3 JASPAR yes 70372746
chr6 45300165 45300177 HNF1B JASPAR yes 70372747
chr6 45300168 45300184 POU4F2 JASPAR yes 70372748
chr6 45300168 45300184 POU4F3 JASPAR yes 70372749
chr6 45300170 45300184 POU4F1 JASPAR yes 70372750
chr6 45300199 45300213 E2F7 JASPAR yes 70372751
chr6 45300218 45300221 MYB TRANSFAC yes 70372752
chr6 45300244 45300256 FOXI1 JASPAR yes 70372753
chr6 45300253 45300257 H1TF2 TRANSFAC yes 70372754
chr6 45300253 45300257 NFE TRANSFAC yes 70372755
chr6 45300253 45300257 SRF TRANSFAC yes 70372756
chr6 45300271 45300286 HNF4A JASPAR yes 70372757
chr6 45300272 45300275 MYB TRANSFAC yes 70372758
chr6 45300272 45300287 HNF4G JASPAR yes 70372759
chr6 45300272 45300287 LEF1 JASPAR yes 70372760
chr6 45300276 45300282 LEF1 TRANSFAC yes 70372761
chr6 45300276 45300282 SOX10 JASPAR yes 70372762
chr6 45300286 45300291 GATA2 JASPAR yes 70372763
chr6 45300307 45300322 FOXA1 JASPAR yes 70372764
chr6 45300308 45300319 FOXB1 JASPAR yes 70372765
chr6 45300308 45300319 FOXC1 JASPAR yes 70372766
chr6 45300308 45300320 FOXC2 JASPAR yes 70372767
chr6 45300324 45300337 POU2F2 JASPAR yes 70372768
chr6 45300333 45300343 POU6F2 JASPAR yes 70372769
chr6 45300334 45300344 GSX2 JASPAR yes 70372770
chr6 45300334 45300345 HOXC11 JASPAR yes 70372771
chr6 45300334 45300345 HOXC13 JASPAR yes 70372772
chr6 45300335 45300343 NKX6-1 JASPAR yes 70372773
chr6 45300335 45300343 NKX6-2 JASPAR yes 70372774
chr6 45300335 45300345 HOXC10 JASPAR yes 70372775
chr6 45300335 45300345 HOXD13 JASPAR yes 70372776
chr6 45300337 45300341 YY1 TRANSFAC yes 70372777
chr6 45300340 45300351 PROP1 JASPAR yes 70372778
chr6 45300346 45300350 YY1 TRANSFAC yes 70372779
SNP sites on vista52126[chr6:45299904-45300369]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 45299981 rs73444672 C T
MZF1 NR2C2 SP1
9049009
chr6 45300083 rs150948607 G GTA
FOXB1 FOXL1
9049010
chr6 45300083 rs769878855 G GTA
FOXB1 FOXL1
9049011
chr6 45300097 rs115695595 A T
IRF1 TBP
9049012
chr6 45300279 rs113847277 T A
HNF4A HNF4G LEF1 SOX10
9049013
Genes possibly regulated by vista52126[chr6:45299904-45300369]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 44777054 45345690 - SUPT3H ENSG00000196284.9 45345690 0.76 1.0 6641 54679
chr6 45295894 45632086 + RUNX2 ENSG00000124813.16 45295894 0.85 1.0 6642 95990
Expression level of Genes
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miRNAs possibly regulated by vista52126[chr6:45299904-45300369]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results