EnhancerDB
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  3. vista52130[chr6:45313959-45314320]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52130[chr6:45313959-45314320]
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Tissue distribution of vista52130
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Transcription factor that possibly regulate vista52130[chr6:45313959-45314320]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 45313963 45313973 MEF2A JASPAR yes 70372886
chr6 45313964 45313972 FOXL1 JASPAR yes 70372887
chr6 45313968 45313972 TEAD2 TRANSFAC yes 70372888
chr6 45313980 45313992 PKNOX2 JASPAR yes 70372889
chr6 45313981 45313991 FIGLA JASPAR yes 70372890
chr6 45313981 45313991 SREBF2 JASPAR yes 70372891
chr6 45314004 45314015 CEBPB JASPAR yes 70372892
chr6 45314005 45314015 CEBPB JASPAR yes 70372893
chr6 45314005 45314015 CEBPD JASPAR yes 70372894
chr6 45314005 45314015 CEBPE JASPAR yes 70372895
chr6 45314005 45314016 CEBPA JASPAR yes 70372896
chr6 45314015 45314024 SOX9 JASPAR yes 70372897
chr6 45314025 45314033 FEV JASPAR yes 70372898
chr6 45314046 45314050 H1TF2 TRANSFAC yes 70372899
chr6 45314046 45314050 NFE TRANSFAC yes 70372900
chr6 45314046 45314050 SRF TRANSFAC yes 70372901
chr6 45314046 45314056 HOXA13 JASPAR yes 70372902
chr6 45314046 45314056 HOXB13 JASPAR yes 70372903
chr6 45314046 45314056 HOXD13 JASPAR yes 70372904
chr6 45314047 45314059 FOXI1 JASPAR yes 70372905
chr6 45314091 45314112 ZNF263 JASPAR yes 70372906
chr6 45314095 45314110 NR2C2 JASPAR yes 70372907
chr6 45314096 45314110 RXRB JASPAR yes 70372908
chr6 45314096 45314110 RXRG JASPAR yes 70372909
chr6 45314113 45314130 RARA JASPAR yes 70372910
chr6 45314137 45314150 TFAP2A JASPAR yes 70372911
chr6 45314137 45314150 TFAP2B JASPAR yes 70372912
chr6 45314137 45314150 TFAP2C JASPAR yes 70372913
chr6 45314150 45314160 POU6F2 JASPAR yes 70372914
chr6 45314154 45314158 YY1 TRANSFAC yes 70372915
chr6 45314232 45314253 IRF1 JASPAR yes 70372916
chr6 45314234 45314249 PRDM1 JASPAR yes 70372917
chr6 45314240 45314255 PRDM1 JASPAR yes 70372918
chr6 45314240 45314255 STAT2 JASPAR yes 70372919
chr6 45314278 45314282 TEAD2 TRANSFAC yes 70372920
chr6 45314289 45314300 FOXH1 JASPAR yes 70372921
chr6 45314290 45314302 FOXC2 JASPAR yes 70372922
chr6 45314291 45314303 FOXI1 JASPAR yes 70372923
chr6 45314293 45314301 FOXG1 JASPAR yes 70372924
chr6 45314294 45314315 IRF1 JASPAR yes 70372925
chr6 45314298 45314302 YY1 TRANSFAC yes 70372926
chr6 45314298 45314319 IRF1 JASPAR yes 70372927
chr6 45314299 45314314 FOXP1 JASPAR yes 70372928
chr6 45314299 45314320 IRF1 JASPAR yes 70372929
chr6 45314301 45314316 FOXP1 JASPAR yes 70372930
chr6 45314303 45314318 FOXP1 JASPAR yes 70372931
chr6 45314304 45314319 FOXP1 JASPAR yes 70372932
chr6 45314305 45314320 FOXP1 JASPAR yes 70372933
SNP sites on vista52130[chr6:45313959-45314320]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 45313987 rs150554243 G T
FIGLA PKNOX2 SREBF2
9049019
chr6 45314273 rs192398525 C G no 9049020
chr6 45314304 rs563075667 C CT,CTT,CTTTT
FOXP1 IRF1
9049021
Genes possibly regulated by vista52130[chr6:45313959-45314320]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 44777054 45345690 - SUPT3H ENSG00000196284.9 45345690 0.76 1.0 6641 68630
chr6 45295894 45632086 + RUNX2 ENSG00000124813.16 45295894 0.85 1.0 6642 81935
Expression level of Genes
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miRNAs possibly regulated by vista52130[chr6:45313959-45314320]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results