EnhancerDB
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  3. vista52133[chr6:45322073-45322342]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52133[chr6:45322073-45322342]
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Tissue distribution of vista52133
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Transcription factor that possibly regulate vista52133[chr6:45322073-45322342]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 45322081 45322100 RFX2 JASPAR yes 70373120
chr6 45322084 45322089 MYC TRANSFAC yes 70373121
chr6 45322086 45322095 NFIX JASPAR yes 70373122
chr6 45322086 45322096 NFIA JASPAR yes 70373123
chr6 45322088 45322094 NFIC JASPAR yes 70373124
chr6 45322103 45322114 BATF JASPAR yes 70373125
chr6 45322109 45322121 MEF2B JASPAR yes 70373126
chr6 45322130 45322144 RORA JASPAR yes 70373127
chr6 45322132 45322143 PHOX2A JASPAR yes 70373128
chr6 45322148 45322163 FOXA1 JASPAR yes 70373129
chr6 45322184 45322189 ETS2 TRANSFAC yes 70373130
chr6 45322199 45322209 HOXC10 JASPAR yes 70373131
chr6 45322199 45322209 HOXD11 JASPAR yes 70373132
chr6 45322199 45322210 HOXA10 JASPAR yes 70373133
chr6 45322199 45322210 HOXC11 JASPAR yes 70373134
chr6 45322199 45322210 HOXC12 JASPAR yes 70373135
chr6 45322199 45322210 HOXD12 JASPAR yes 70373136
chr6 45322200 45322209 CDX1 JASPAR yes 70373137
chr6 45322200 45322211 CDX2 JASPAR yes 70373138
chr6 45322222 45322241 REST JASPAR yes 70373139
chr6 45322235 45322245 POU6F2 JASPAR yes 70373140
chr6 45322239 45322243 YY1 TRANSFAC yes 70373141
chr6 45322257 45322268 NFE2L2 JASPAR yes 70373142
chr6 45322260 45322263 MYB TRANSFAC yes 70373143
chr6 45322272 45322293 IRF1 JASPAR yes 70373144
chr6 45322275 45322289 STAT1 JASPAR yes 70373145
chr6 45322276 45322290 IRF8 JASPAR yes 70373146
chr6 45322285 45322290 ETS2 TRANSFAC yes 70373147
chr6 45322291 45322296 GATA2 JASPAR yes 70373148
chr6 45322300 45322310 NFKB1 JASPAR yes 70373149
chr6 45322312 45322316 YY1 TRANSFAC yes 70373150
chr6 45322319 45322332 ELF1 JASPAR yes 70373151
chr6 45322319 45322333 SPI1 JASPAR yes 70373152
chr6 45322319 45322333 SPIC JASPAR yes 70373153
chr6 45322322 45322338 POU4F2 JASPAR yes 70373154
chr6 45322322 45322338 POU4F3 JASPAR yes 70373155
chr6 45322324 45322338 POU4F1 JASPAR yes 70373156
SNP sites on vista52133[chr6:45322073-45322342]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 45322117 rs112922549 A G
MEF2B
9049035
chr6 45322223 rs6458440 C T
REST
9049036
chr6 45322281 rs71779492 TCA T
IRF1 IRF8 STAT1
9049037
Genes possibly regulated by vista52133[chr6:45322073-45322342]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 44777054 45345690 - SUPT3H ENSG00000196284.9 45345690 0.76 1.0 6641 76652
chr6 45295894 45632086 + RUNX2 ENSG00000124813.16 45295894 0.85 1.0 6642 73821
Expression level of Genes
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miRNAs possibly regulated by vista52133[chr6:45322073-45322342]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results