EnhancerDB
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  3. vista52139[chr6:45354242-45354498]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52139[chr6:45354242-45354498]
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Tissue distribution of vista52139
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Transcription factor that possibly regulate vista52139[chr6:45354242-45354498]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 45354249 45354270 ZNF263 JASPAR yes 70373310
chr6 45354249 45354270 ZNF263 JASPAR yes 101888357
chr6 45354251 45354263 PKNOX1 JASPAR yes 70373311
chr6 45354251 45354263 TGIF1 JASPAR yes 70373312
chr6 45354251 45354263 TGIF2 JASPAR yes 70373313
chr6 45354251 45354263 PKNOX1 JASPAR yes 101888358
chr6 45354251 45354263 TGIF1 JASPAR yes 101888359
chr6 45354251 45354263 TGIF2 JASPAR yes 101888360
chr6 45354262 45354267 ETS2 TRANSFAC yes 70373314
chr6 45354262 45354267 ETS2 TRANSFAC yes 101888361
chr6 45354270 45354273 MYB TRANSFAC yes 70373315
chr6 45354270 45354273 MYB TRANSFAC yes 101888362
chr6 45354286 45354291 MYC TRANSFAC yes 70373316
chr6 45354286 45354291 MYC TRANSFAC yes 101888363
chr6 45354295 45354306 ESRRB JASPAR yes 70373317
chr6 45354295 45354306 ESRRB JASPAR yes 101888364
chr6 45354326 45354338 POU2F1 JASPAR yes 70373318
chr6 45354326 45354338 POU2F1 JASPAR yes 101888365
chr6 45354328 45354337 POU3F4 JASPAR yes 70373319
chr6 45354328 45354337 POU5F1B JASPAR yes 70373320
chr6 45354328 45354337 POU3F4 JASPAR yes 101888366
chr6 45354328 45354337 POU5F1B JASPAR yes 101888367
chr6 45354330 45354336 TCF4 TRANSFAC yes 70373321
chr6 45354330 45354336 TCF4 TRANSFAC yes 101888368
chr6 45354348 45354354 GATA1 TRANSFAC yes 70373322
chr6 45354348 45354354 GATA1 TRANSFAC yes 101888369
chr6 45354354 45354366 MEF2D JASPAR yes 70373323
chr6 45354354 45354366 MEF2D JASPAR yes 101888370
chr6 45354382 45354386 YY1 TRANSFAC yes 70373324
chr6 45354382 45354386 YY1 TRANSFAC yes 101888371
chr6 45354405 45354418 ATF4 JASPAR yes 70373325
chr6 45354405 45354418 ATF4 JASPAR yes 101888372
chr6 45354406 45354417 NFE2 JASPAR yes 70373326
chr6 45354406 45354417 NFE2 JASPAR yes 101888373
chr6 45354406 45354420 XBP1 JASPAR yes 70373327
chr6 45354406 45354420 XBP1 JASPAR yes 101888374
chr6 45354416 45354430 PAX6 JASPAR yes 70373328
chr6 45354416 45354430 PAX6 JASPAR yes 101888375
chr6 45354445 45354448 MYB TRANSFAC yes 70373329
chr6 45354445 45354448 MYB TRANSFAC yes 101888376
chr6 45354449 45354463 SPI1 JASPAR yes 70373330
chr6 45354449 45354463 SPIC JASPAR yes 70373331
chr6 45354449 45354463 SPI1 JASPAR yes 101888377
chr6 45354449 45354463 SPIC JASPAR yes 101888378
chr6 45354454 45354462 EHF JASPAR yes 70373332
chr6 45354454 45354462 EHF JASPAR yes 101888379
chr6 45354460 45354465 GATA2 JASPAR yes 70373333
chr6 45354460 45354465 GATA2 JASPAR yes 101888380
chr6 45354487 45354503 SOX4 JASPAR yes 70373334
chr6 45354487 45354503 SOX4 JASPAR yes 101888381
chr6 45354488 45354503 SOX21 JASPAR yes 70373335
chr6 45354488 45354503 SOX21 JASPAR yes 101888382
SNP sites on vista52139[chr6:45354242-45354498]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista52139[chr6:45354242-45354498]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 44777054 45345690 - SUPT3H ENSG00000196284.9 45345690 0.76 1.0 6641 91448
chr6 45295894 45632086 + RUNX2 ENSG00000124813.16 45295894 0.85 1.0 6642 41652
Expression level of Genes
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miRNAs possibly regulated by vista52139[chr6:45354242-45354498]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results