EnhancerDB
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  3. vista52142[chr6:45390987-45391259]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52142[chr6:45390987-45391259]
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Tissue distribution of vista52142
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Transcription factor that possibly regulate vista52142[chr6:45390987-45391259]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 45390995 45391006 E2F4 JASPAR yes 70373393
chr6 45391006 45391027 ZNF263 JASPAR yes 70373394
chr6 45391009 45391019 SP1 JASPAR yes 70373395
chr6 45391024 45391030 MZF1 JASPAR yes 70373396
chr6 45391066 45391074 SP1 TRANSFAC yes 70373397
chr6 45391066 45391076 SP1 JASPAR yes 70373398
chr6 45391067 45391073 SP1 TRANSFAC yes 70373399
chr6 45391067 45391077 SP1 JASPAR yes 70373400
chr6 45391068 45391075 SP1 TRANSFAC yes 70373401
chr6 45391069 45391074 SP1 TRANSFAC yes 70373402
chr6 45391069 45391075 SP1 TRANSFAC yes 70373403
chr6 45391079 45391088 TFAP2A JASPAR yes 70373404
chr6 45391087 45391098 NFKB1 JASPAR yes 70373405
chr6 45391103 45391117 EBF1 JASPAR yes 70373406
chr6 45391104 45391115 EBF1 JASPAR yes 70373407
chr6 45391105 45391117 TFAP2A JASPAR yes 70373408
chr6 45391105 45391117 TFAP2B JASPAR yes 70373409
chr6 45391105 45391117 TFAP2C JASPAR yes 70373410
chr6 45391105 45391120 TFAP2A JASPAR yes 70373411
chr6 45391105 45391120 TFAP2C JASPAR yes 70373412
chr6 45391106 45391117 EBF1 JASPAR yes 70373413
chr6 45391106 45391117 TFAP2A JASPAR yes 70373414
chr6 45391106 45391117 TFAP2B JASPAR yes 70373415
chr6 45391107 45391116 TFAP2A JASPAR yes 70373416
chr6 45391113 45391124 E2F4 JASPAR yes 70373417
chr6 45391113 45391124 E2F6 JASPAR yes 70373418
chr6 45391114 45391125 E2F1 JASPAR yes 70373419
chr6 45391123 45391134 ELF5 JASPAR yes 70373420
chr6 45391123 45391135 EHF JASPAR yes 70373421
chr6 45391123 45391135 ELF4 JASPAR yes 70373422
chr6 45391125 45391131 ETS1 JASPAR yes 70373423
chr6 45391125 45391131 SPI1 JASPAR yes 70373424
chr6 45391125 45391135 ELK1 JASPAR yes 70373425
chr6 45391130 45391140 NFKB1 JASPAR yes 70373426
chr6 45391130 45391140 RELA JASPAR yes 70373427
chr6 45391164 45391175 NRF1 JASPAR yes 70373428
chr6 45391237 45391249 HINFP JASPAR yes 70373429
chr6 45391243 45391253 SP1 JASPAR yes 70373430
SNP sites on vista52142[chr6:45390987-45391259]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 45391031 rs539233734 A G no 9049331
chr6 45391191 rs111913609 G A no 9049332
Genes possibly regulated by vista52142[chr6:45390987-45391259]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 44777054 45345690 - SUPT3H ENSG00000196284.9 45345690 0.76 1.0 6641 54703
chr6 45295894 45632086 + RUNX2 ENSG00000124813.16 45295894 0.85 1.0 6642 4907
Expression level of Genes
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miRNAs possibly regulated by vista52142[chr6:45390987-45391259]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results