EnhancerDB
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  3. vista5216[chr1:221949932-221950137]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5216[chr1:221949932-221950137]
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Tissue distribution of vista5216
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Transcription factor that possibly regulate vista5216[chr1:221949932-221950137]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 221949835 221950436 STAT3 UCSC Txn Factor no Conserved 107872033
chr1 221949835 221950436 STAT3 UCSC Txn Factor no Conserved 107872034
chr1 221949839 221950237 STAT1 UCSC Txn Factor no Conserved 107872037
chr1 221949839 221950237 STAT1 UCSC Txn Factor no Conserved 107872038
chr1 221950100 221951570 NFIC UCSC Txn Factor no Conserved 107872075
chr1 221950100 221951570 NFIC UCSC Txn Factor no Conserved 107872076
chr1 221950100 221951570 NFIC UCSC Txn Factor no Conserved 107872077
chr1 221950108 221950538 RUNX3 UCSC Txn Factor no Conserved 107872081
chr1 221950108 221950538 RUNX3 UCSC Txn Factor no Conserved 107872082
chr1 221949938 221949948 HOXA13 JASPAR yes 35566284
chr1 221949938 221949948 HOXB13 JASPAR yes 35566285
chr1 221949938 221949948 HOXD13 JASPAR yes 35566286
chr1 221949938 221949948 HOXA13 JASPAR yes 118464305
chr1 221949938 221949948 HOXB13 JASPAR yes 118464306
chr1 221949938 221949948 HOXD13 JASPAR yes 118464307
chr1 221949938 221949949 HOXA10 JASPAR yes 35566287
chr1 221949938 221949949 HOXA10 JASPAR yes 118464308
chr1 221949939 221949948 CDX1 JASPAR yes 35566288
chr1 221949939 221949948 CDX1 JASPAR yes 118464309
chr1 221949939 221949950 CDX2 JASPAR yes 35566289
chr1 221949939 221949950 CDX2 JASPAR yes 118464310
chr1 221949960 221949978 SRF JASPAR yes 35566290
chr1 221949960 221949978 SRF JASPAR yes 118464311
chr1 221949964 221949972 FOXO3 JASPAR yes 35566291
chr1 221949964 221949972 FOXO3 JASPAR yes 118464312
chr1 221949971 221949976 ETS2 TRANSFAC yes 35566292
chr1 221949971 221949976 ETS2 TRANSFAC yes 118464313
chr1 221949973 221949989 POU4F3 JASPAR yes 35566293
chr1 221949973 221949989 POU4F3 JASPAR yes 118464314
chr1 221949975 221949989 POU4F1 JASPAR yes 35566294
chr1 221949975 221949989 POU4F1 JASPAR yes 118464315
chr1 221949977 221949985 RHOXF1 JASPAR yes 35566295
chr1 221949977 221949985 RHOXF1 JASPAR yes 118464316
chr1 221949991 221950006 STAT1 JASPAR yes 35566296
chr1 221949991 221950006 STAT1 JASPAR yes 118464317
chr1 221949993 221950004 STAT1 JASPAR yes 35566297
chr1 221949993 221950004 STAT3 JASPAR yes 35566298
chr1 221949993 221950004 STAT1 JASPAR yes 118464318
chr1 221949993 221950004 STAT3 JASPAR yes 118464319
chr1 221950012 221950027 STAT1 JASPAR yes 35566299
chr1 221950012 221950027 STAT1 JASPAR yes 118464320
chr1 221950014 221950025 STAT1 JASPAR yes 35566300
chr1 221950014 221950025 STAT3 JASPAR yes 35566301
chr1 221950014 221950025 STAT1 JASPAR yes 118464321
chr1 221950014 221950025 STAT3 JASPAR yes 118464322
chr1 221950031 221950045 SPIC JASPAR yes 35566302
chr1 221950031 221950045 SPIC JASPAR yes 118464323
chr1 221950035 221950041 MZF1 JASPAR yes 35566303
chr1 221950035 221950041 MZF1 JASPAR yes 118464324
chr1 221950035 221950053 SRF JASPAR yes 35566304
chr1 221950035 221950053 SRF JASPAR yes 118464325
chr1 221950039 221950043 YY1 TRANSFAC yes 35566305
chr1 221950039 221950043 YY1 TRANSFAC yes 118464326
chr1 221950058 221950061 MYB TRANSFAC yes 35566306
chr1 221950058 221950061 MYB TRANSFAC yes 118464327
chr1 221950058 221950069 FLI1 JASPAR yes 35566307
chr1 221950058 221950069 FLI1 JASPAR yes 118464328
chr1 221950058 221950071 ELF3 JASPAR yes 35566308
chr1 221950058 221950071 ELF3 JASPAR yes 118464329
chr1 221950059 221950070 ELF5 JASPAR yes 35566309
chr1 221950059 221950070 ELF5 JASPAR yes 118464330
chr1 221950059 221950071 EHF JASPAR yes 35566310
chr1 221950059 221950071 ELF4 JASPAR yes 35566311
chr1 221950059 221950071 EHF JASPAR yes 118464331
chr1 221950059 221950071 ELF4 JASPAR yes 118464332
chr1 221950059 221950072 ELF1 JASPAR yes 35566312
chr1 221950059 221950072 ELF1 JASPAR yes 118464333
chr1 221950059 221950073 SPI1 JASPAR yes 35566313
chr1 221950059 221950073 SPIC JASPAR yes 35566314
chr1 221950059 221950073 SPI1 JASPAR yes 118464334
chr1 221950059 221950073 SPIC JASPAR yes 118464335
chr1 221950060 221950067 SPI1 JASPAR yes 35566315
chr1 221950060 221950067 SPI1 JASPAR yes 118464336
chr1 221950060 221950068 EHF JASPAR yes 35566316
chr1 221950060 221950068 FEV JASPAR yes 35566317
chr1 221950060 221950068 EHF JASPAR yes 118464337
chr1 221950060 221950068 FEV JASPAR yes 118464338
chr1 221950061 221950074 ZBTB18 JASPAR yes 35566318
chr1 221950061 221950074 ZBTB18 JASPAR yes 118464339
chr1 221950065 221950084 RFX2 JASPAR yes 35566319
chr1 221950065 221950084 RFX2 JASPAR yes 118464340
chr1 221950067 221950082 RFX5 JASPAR yes 35566320
chr1 221950067 221950082 RFX5 JASPAR yes 118464341
chr1 221950069 221950085 RFX2 JASPAR yes 35566321
chr1 221950069 221950085 RFX3 JASPAR yes 35566322
chr1 221950069 221950085 RFX4 JASPAR yes 35566323
chr1 221950069 221950085 RFX5 JASPAR yes 35566324
chr1 221950069 221950085 RFX2 JASPAR yes 118464342
chr1 221950069 221950085 RFX3 JASPAR yes 118464343
chr1 221950069 221950085 RFX4 JASPAR yes 118464344
chr1 221950069 221950085 RFX5 JASPAR yes 118464345
chr1 221950070 221950089 RFX2 JASPAR yes 35566325
chr1 221950070 221950089 RFX2 JASPAR yes 118464346
chr1 221950077 221950089 PKNOX1 JASPAR yes 35566326
chr1 221950077 221950089 PKNOX2 JASPAR yes 35566327
chr1 221950077 221950089 TGIF1 JASPAR yes 35566328
chr1 221950077 221950089 TGIF2 JASPAR yes 35566329
chr1 221950077 221950089 PKNOX1 JASPAR yes 118464347
chr1 221950077 221950089 PKNOX2 JASPAR yes 118464348
chr1 221950077 221950089 TGIF1 JASPAR yes 118464349
chr1 221950077 221950089 TGIF2 JASPAR yes 118464350
chr1 221950120 221950135 AR JASPAR yes 35566330
chr1 221950120 221950135 AR JASPAR yes 118464351
chr1 221950120 221950138 ESR2 JASPAR yes 35566331
chr1 221950120 221950138 ESR2 JASPAR yes 118464352
chr1 221950137 221950150 NR2F1 JASPAR yes 35566332
chr1 221950137 221950150 NR2F1 JASPAR yes 118464353
SNP sites on vista5216[chr1:221949932-221950137]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 221950070 rs530043689 T C
EHF ELF1 ELF3 ELF4 ELF5 RFX2 RFX3 RFX4 RFX5 SPI1 SPIC STAT1 STAT3 ZBTB18
968037
chr1 221950074 rs114618555 G A
RFX2 RFX3 RFX4 RFX5 STAT1 STAT3 ZBTB18
968038
chr1 221950079 rs9441949 G A,C
PKNOX1 PKNOX2 RFX2 RFX3 RFX4 RFX5 STAT1 STAT3 TGIF1 TGIF2
968039
chr1 221950101 rs145576425 G A,C
NFIC STAT1 STAT3
968040
Genes possibly regulated by vista5216[chr1:221949932-221950137]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 221874766 221915518 - DUSP10 ENSG00000143507.13 221915518 0.73 0.99 1863 65586
Expression level of Genes
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miRNAs possibly regulated by vista5216[chr1:221949932-221950137]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results