EnhancerDB
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  3. vista52170[chr6:45937892-45938281]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52170[chr6:45937892-45938281]
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Tissue distribution of vista52170
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Transcription factor that possibly regulate vista52170[chr6:45937892-45938281]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 45937902 45937914 HES5 JASPAR yes 70374661
chr6 45937902 45937914 HES5 JASPAR yes 101938247
chr6 45937913 45937921 MEIS2 JASPAR yes 70374662
chr6 45937913 45937921 MEIS3 JASPAR yes 70374663
chr6 45937913 45937921 MEIS2 JASPAR yes 101938248
chr6 45937913 45937921 MEIS3 JASPAR yes 101938249
chr6 45937914 45937918 NFE TRANSFAC yes 70374664
chr6 45937914 45937918 NFE TRANSFAC yes 101938250
chr6 45937915 45937926 USF1 JASPAR yes 70374665
chr6 45937915 45937926 USF1 JASPAR yes 101938251
chr6 45937916 45937926 TFE3 JASPAR yes 70374666
chr6 45937916 45937926 TFEB JASPAR yes 70374667
chr6 45937916 45937926 TFE3 JASPAR yes 101938252
chr6 45937916 45937926 TFEB JASPAR yes 101938253
chr6 45937916 45937927 USF2 JASPAR yes 70374668
chr6 45937916 45937927 USF2 JASPAR yes 101938254
chr6 45937922 45937934 ZBTB7A JASPAR yes 70374669
chr6 45937922 45937934 ZBTB7A JASPAR yes 101938255
chr6 45937923 45937935 GLI2 JASPAR yes 70374670
chr6 45937923 45937935 ZBTB7B JASPAR yes 70374671
chr6 45937923 45937935 GLI2 JASPAR yes 101938256
chr6 45937923 45937935 ZBTB7B JASPAR yes 101938257
chr6 45937969 45937984 RUNX2 JASPAR yes 70374672
chr6 45937969 45937984 RUNX2 JASPAR yes 101938258
chr6 45937972 45937983 RUNX1 JASPAR yes 70374673
chr6 45937972 45937983 RUNX1 JASPAR yes 101938259
chr6 45937973 45937983 RUNX3 JASPAR yes 70374674
chr6 45937973 45937983 RUNX3 JASPAR yes 101938260
chr6 45937974 45937983 RUNX2 JASPAR yes 70374675
chr6 45937974 45937983 RUNX2 JASPAR yes 101938261
chr6 45938022 45938030 FOXO3 JASPAR yes 70374676
chr6 45938022 45938030 FOXO3 JASPAR yes 101938262
chr6 45938076 45938097 IRF1 JASPAR yes 70374677
chr6 45938076 45938097 IRF1 JASPAR yes 101938263
chr6 45938078 45938082 H1TF2 TRANSFAC yes 70374678
chr6 45938078 45938082 NFE TRANSFAC yes 70374679
chr6 45938078 45938082 SRF TRANSFAC yes 70374680
chr6 45938078 45938082 H1TF2 TRANSFAC yes 101938264
chr6 45938078 45938082 NFE TRANSFAC yes 101938265
chr6 45938078 45938082 SRF TRANSFAC yes 101938266
chr6 45938078 45938093 STAT2 JASPAR yes 70374681
chr6 45938078 45938093 STAT2 JASPAR yes 101938267
chr6 45938079 45938093 STAT1 JASPAR yes 70374682
chr6 45938079 45938093 STAT1 JASPAR yes 101938268
chr6 45938080 45938094 IRF7 JASPAR yes 70374683
chr6 45938080 45938094 IRF8 JASPAR yes 70374684
chr6 45938080 45938094 IRF7 JASPAR yes 101938269
chr6 45938080 45938094 IRF8 JASPAR yes 101938270
chr6 45938080 45938095 IRF9 JASPAR yes 70374685
chr6 45938080 45938095 IRF9 JASPAR yes 101938271
chr6 45938103 45938117 ONECUT1 JASPAR yes 70374686
chr6 45938103 45938117 ONECUT2 JASPAR yes 70374687
chr6 45938103 45938117 ONECUT3 JASPAR yes 70374688
chr6 45938103 45938117 ONECUT1 JASPAR yes 101938272
chr6 45938103 45938117 ONECUT2 JASPAR yes 101938273
chr6 45938103 45938117 ONECUT3 JASPAR yes 101938274
chr6 45938106 45938116 PAX3 JASPAR yes 70374689
chr6 45938106 45938116 PAX7 JASPAR yes 70374690
chr6 45938106 45938116 PAX3 JASPAR yes 101938275
chr6 45938106 45938116 PAX7 JASPAR yes 101938276
chr6 45938160 45938170 ALX3 JASPAR yes 70374691
chr6 45938160 45938170 ALX3 JASPAR yes 101938277
chr6 45938161 45938169 BSX JASPAR yes 70374692
chr6 45938161 45938169 DLX6 JASPAR yes 70374693
chr6 45938161 45938169 MSX1 JASPAR yes 70374694
chr6 45938161 45938169 MSX2 JASPAR yes 70374695
chr6 45938161 45938169 BSX JASPAR yes 101938278
chr6 45938161 45938169 DLX6 JASPAR yes 101938279
chr6 45938161 45938169 MSX1 JASPAR yes 101938280
chr6 45938161 45938169 MSX2 JASPAR yes 101938281
chr6 45938177 45938181 NFE TRANSFAC yes 70374696
chr6 45938177 45938181 NFE TRANSFAC yes 101938282
chr6 45938182 45938193 NFIL3 JASPAR yes 70374697
chr6 45938182 45938193 NFIL3 JASPAR yes 101938283
chr6 45938190 45938196 MZF1 JASPAR yes 70374698
chr6 45938190 45938196 MZF1 JASPAR yes 101938284
chr6 45938193 45938211 SRF JASPAR yes 70374699
chr6 45938193 45938211 SRF JASPAR yes 101938285
chr6 45938194 45938208 PLAG1 JASPAR yes 70374700
chr6 45938194 45938208 PLAG1 JASPAR yes 101938286
chr6 45938199 45938213 SPIC JASPAR yes 70374701
chr6 45938199 45938213 SPIC JASPAR yes 101938287
chr6 45938201 45938222 IRF1 JASPAR yes 70374702
chr6 45938201 45938222 IRF1 JASPAR yes 101938288
chr6 45938205 45938219 STAT1 JASPAR yes 70374703
chr6 45938205 45938219 STAT1 JASPAR yes 101938289
chr6 45938205 45938220 STAT2 JASPAR yes 70374704
chr6 45938205 45938220 STAT2 JASPAR yes 101938290
chr6 45938206 45938218 IRF1 JASPAR yes 70374705
chr6 45938206 45938218 IRF1 JASPAR yes 101938291
chr6 45938208 45938221 POU2F2 JASPAR yes 70374706
chr6 45938208 45938221 POU2F2 JASPAR yes 101938292
chr6 45938237 45938250 ELF1 JASPAR yes 70374707
chr6 45938237 45938250 ELF1 JASPAR yes 101938293
chr6 45938240 45938251 FLI1 JASPAR yes 70374708
chr6 45938240 45938251 FLI1 JASPAR yes 101938294
chr6 45938241 45938249 FEV JASPAR yes 70374709
chr6 45938241 45938249 FEV JASPAR yes 101938295
chr6 45938253 45938263 HOXA13 JASPAR yes 70374710
chr6 45938253 45938263 HOXA13 JASPAR yes 101938296
chr6 45938254 45938265 CDX2 JASPAR yes 70374711
chr6 45938254 45938265 CDX2 JASPAR yes 101938297
chr6 45938264 45938275 CDX2 JASPAR yes 70374712
chr6 45938264 45938275 CDX2 JASPAR yes 101938298
chr6 45938266 45938275 CDX1 JASPAR yes 70374713
chr6 45938266 45938275 CDX1 JASPAR yes 101938299
chr6 45938266 45938276 HOXA13 JASPAR yes 70374714
chr6 45938266 45938276 HOXB13 JASPAR yes 70374715
chr6 45938266 45938276 HOXD13 JASPAR yes 70374716
chr6 45938266 45938276 HOXA13 JASPAR yes 101938300
chr6 45938266 45938276 HOXB13 JASPAR yes 101938301
chr6 45938266 45938276 HOXD13 JASPAR yes 101938302
chr6 45938270 45938276 TBP TRANSFAC yes 70374717
chr6 45938270 45938276 TBP TRANSFAC yes 101938303
chr6 45938270 45938281 FOXC1 JASPAR yes 70374718
chr6 45938270 45938281 FOXC1 JASPAR yes 101938304
SNP sites on vista52170[chr6:45937892-45938281]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 45937948 rs556297131 G A no 9053967
chr6 45938045 rs3836937 G GA no 9053968
chr6 45938045 rs397725946 G GA no 9053969
chr6 45938156 rs7761346 C T no 9053970
Genes possibly regulated by vista52170[chr6:45937892-45938281]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista52170[chr6:45937892-45938281]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results