EnhancerDB
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  3. vista52189[chr6:46740254-46741123]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52189[chr6:46740254-46741123]
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Tissue distribution of vista52189
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Transcription factor that possibly regulate vista52189[chr6:46740254-46741123]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 46740581 46740857 MAX UCSC Txn Factor no Conserved 108540545
chr6 46740250 46740264 E2F7 JASPAR yes 70375696
chr6 46740250 46740264 E2F7 JASPAR yes 101977505
chr6 46740261 46740272 HOXC13 JASPAR yes 70375697
chr6 46740261 46740272 HOXC13 JASPAR yes 101977506
chr6 46740262 46740272 HOXA13 JASPAR yes 70375698
chr6 46740262 46740272 HOXB13 JASPAR yes 70375699
chr6 46740262 46740272 HOXD13 JASPAR yes 70375700
chr6 46740262 46740272 HOXA13 JASPAR yes 101977507
chr6 46740262 46740272 HOXB13 JASPAR yes 101977508
chr6 46740262 46740272 HOXD13 JASPAR yes 101977509
chr6 46740264 46740268 TEAD2 TRANSFAC yes 70375701
chr6 46740264 46740268 TEAD2 TRANSFAC yes 101977510
chr6 46740264 46740269 TBP TRANSFAC yes 70375702
chr6 46740264 46740269 TBP TRANSFAC yes 101977511
chr6 46740264 46740270 TFIID TRANSFAC yes 70375703
chr6 46740264 46740270 TFIID TRANSFAC yes 101977512
chr6 46740269 46740279 MAX JASPAR yes 70375704
chr6 46740269 46740279 MAX JASPAR yes 101977513
chr6 46740274 46740285 DMRT3 JASPAR yes 70375705
chr6 46740274 46740285 DMRT3 JASPAR yes 101977514
chr6 46740278 46740281 MYB TRANSFAC yes 70375706
chr6 46740278 46740281 MYB TRANSFAC yes 101977515
chr6 46740287 46740306 PAX5 JASPAR yes 70375707
chr6 46740287 46740306 PAX5 JASPAR yes 101977516
chr6 46740289 46740293 LFA1 TRANSFAC yes 70375708
chr6 46740289 46740293 LFA1 TRANSFAC yes 101977517
chr6 46740305 46740309 H1TF2 TRANSFAC yes 70375709
chr6 46740305 46740309 NFE TRANSFAC yes 70375710
chr6 46740305 46740309 SRF TRANSFAC yes 70375711
chr6 46740305 46740309 H1TF2 TRANSFAC yes 101977518
chr6 46740305 46740309 NFE TRANSFAC yes 101977519
chr6 46740305 46740309 SRF TRANSFAC yes 101977520
chr6 46740314 46740326 POU2F1 JASPAR yes 70375712
chr6 46740314 46740326 POU2F1 JASPAR yes 101977521
chr6 46740314 46740328 POU1F1 JASPAR yes 70375713
chr6 46740314 46740328 POU1F1 JASPAR yes 101977522
chr6 46740315 46740327 POU3F2 JASPAR yes 70375714
chr6 46740315 46740327 POU3F2 JASPAR yes 101977523
chr6 46740315 46740328 POU2F2 JASPAR yes 70375715
chr6 46740315 46740328 POU2F2 JASPAR yes 101977524
chr6 46740316 46740325 POU3F4 JASPAR yes 70375716
chr6 46740316 46740325 POU5F1B JASPAR yes 70375717
chr6 46740316 46740325 POU3F4 JASPAR yes 101977525
chr6 46740316 46740325 POU5F1B JASPAR yes 101977526
chr6 46740322 46740337 HNF4G JASPAR yes 70375718
chr6 46740322 46740337 HNF4G JASPAR yes 101977527
chr6 46740323 46740338 HNF4A JASPAR yes 70375719
chr6 46740323 46740338 HNF4A JASPAR yes 101977528
chr6 46740370 46740381 NFE2L2 JASPAR yes 70375720
chr6 46740370 46740381 NFE2L2 JASPAR yes 101977529
chr6 46740372 46740378 SOX10 JASPAR yes 70375721
chr6 46740372 46740378 SOX10 JASPAR yes 101977530
chr6 46740375 46740390 AR JASPAR yes 70375722
chr6 46740375 46740390 AR JASPAR yes 101977531
chr6 46740392 46740396 YY1 TRANSFAC yes 70375723
chr6 46740392 46740396 YY1 TRANSFAC yes 101977532
chr6 46740408 46740421 ATF4 JASPAR yes 70375724
chr6 46740408 46740421 ATF4 JASPAR yes 101977533
chr6 46740433 46740437 LFA1 TRANSFAC yes 70375725
chr6 46740433 46740437 LFA1 TRANSFAC yes 101977534
chr6 46740450 46740461 STAT1 JASPAR yes 70375726
chr6 46740450 46740461 STAT1 JASPAR yes 101977535
chr6 46740476 46740489 HSF2 JASPAR yes 70375727
chr6 46740476 46740489 HSF2 JASPAR yes 101977536
chr6 46740484 46740498 IRF7 JASPAR yes 70375728
chr6 46740484 46740498 IRF7 JASPAR yes 101977537
chr6 46740489 46740509 ESR1 JASPAR yes 70375729
chr6 46740489 46740509 ESR1 JASPAR yes 101977538
chr6 46740495 46740499 LFA1 TRANSFAC yes 70375730
chr6 46740495 46740499 LFA1 TRANSFAC yes 101977539
chr6 46740521 46740525 YY1 TRANSFAC yes 70375731
chr6 46740521 46740525 YY1 TRANSFAC yes 101977540
chr6 46740524 46740528 TEAD2 TRANSFAC yes 70375732
chr6 46740524 46740528 TEAD2 TRANSFAC yes 101977541
chr6 46740526 46740533 NKX3-1 JASPAR yes 70375733
chr6 46740526 46740533 NKX3-1 JASPAR yes 101977542
chr6 46740541 46740547 MYC TRANSFAC yes 70375734
chr6 46740541 46740547 MYC TRANSFAC yes 101977543
chr6 46740554 46740558 YY1 TRANSFAC yes 70375735
chr6 46740554 46740558 YY1 TRANSFAC yes 101977544
chr6 46740561 46740572 USF1 JASPAR yes 70375736
chr6 46740561 46740572 USF2 JASPAR yes 70375737
chr6 46740561 46740572 USF1 JASPAR yes 101977545
chr6 46740561 46740572 USF2 JASPAR yes 101977546
chr6 46740561 46740573 PKNOX1 JASPAR yes 70375738
chr6 46740561 46740573 PKNOX2 JASPAR yes 70375739
chr6 46740561 46740573 TGIF1 JASPAR yes 70375740
chr6 46740561 46740573 TGIF2 JASPAR yes 70375741
chr6 46740561 46740573 PKNOX1 JASPAR yes 101977547
chr6 46740561 46740573 PKNOX2 JASPAR yes 101977548
chr6 46740561 46740573 TGIF1 JASPAR yes 101977549
chr6 46740561 46740573 TGIF2 JASPAR yes 101977550
chr6 46740571 46740575 YY1 TRANSFAC yes 70375742
chr6 46740571 46740575 YY1 TRANSFAC yes 101977551
chr6 46740606 46740617 SPDEF JASPAR yes 70375743
chr6 46740606 46740617 SPDEF JASPAR yes 101977552
chr6 46740610 46740615 GATA2 JASPAR yes 70375744
chr6 46740610 46740615 GATA2 JASPAR yes 101977553
chr6 46740613 46740617 TEAD2 TRANSFAC yes 70375745
chr6 46740613 46740617 TEAD2 TRANSFAC yes 101977554
chr6 46740615 46740618 MYB TRANSFAC yes 70375746
chr6 46740615 46740618 MYB TRANSFAC yes 101977555
chr6 46740620 46740635 HNF4G JASPAR yes 70375747
chr6 46740620 46740635 HNF4G JASPAR yes 101977556
chr6 46740621 46740636 HNF4A JASPAR yes 70375748
chr6 46740621 46740636 HNF4A JASPAR yes 101977557
chr6 46740631 46740646 TFAP2A JASPAR yes 70375749
chr6 46740631 46740646 TFAP2A JASPAR yes 101977558
chr6 46740649 46740663 SPI1 JASPAR yes 70375750
chr6 46740649 46740663 SPI1 JASPAR yes 101977559
chr6 46740652 46740659 SPIB JASPAR yes 70375751
chr6 46740652 46740659 SPIB JASPAR yes 101977560
chr6 46740689 46740701 POU3F2 JASPAR yes 70375752
chr6 46740689 46740701 POU3F2 JASPAR yes 101977561
chr6 46740690 46740694 YY1 TRANSFAC yes 70375753
chr6 46740690 46740694 YY1 TRANSFAC yes 101977562
chr6 46740711 46740726 NR2C2 JASPAR yes 70375754
chr6 46740711 46740726 NR2C2 JASPAR yes 101977563
chr6 46740730 46740746 SOX4 JASPAR yes 70375755
chr6 46740730 46740746 SOX4 JASPAR yes 101977564
chr6 46740731 46740741 TFE3 JASPAR yes 70375756
chr6 46740731 46740741 TFEB JASPAR yes 70375757
chr6 46740731 46740741 TFE3 JASPAR yes 101977565
chr6 46740731 46740741 TFEB JASPAR yes 101977566
chr6 46740731 46740742 USF1 JASPAR yes 70375758
chr6 46740731 46740742 USF2 JASPAR yes 70375759
chr6 46740731 46740742 USF1 JASPAR yes 101977567
chr6 46740731 46740742 USF2 JASPAR yes 101977568
chr6 46740732 46740742 MAX JASPAR yes 70375760
chr6 46740732 46740742 MAX JASPAR yes 101977569
chr6 46740741 46740749 FOXO3 JASPAR yes 70375761
chr6 46740741 46740749 FOXO3 JASPAR yes 101977570
chr6 46740753 46740768 ZIC3 JASPAR yes 70375762
chr6 46740753 46740768 ZIC4 JASPAR yes 70375763
chr6 46740753 46740768 ZIC3 JASPAR yes 101977571
chr6 46740753 46740768 ZIC4 JASPAR yes 101977572
chr6 46740754 46740768 ZIC1 JASPAR yes 70375764
chr6 46740754 46740768 ZIC1 JASPAR yes 101977573
chr6 46740778 46740793 AR JASPAR yes 70375765
chr6 46740778 46740793 AR JASPAR yes 101977574
chr6 46740781 46740791 MSC JASPAR yes 70375766
chr6 46740781 46740791 MSC JASPAR yes 101977575
chr6 46740802 46740817 STAT2 JASPAR yes 70375767
chr6 46740802 46740817 STAT2 JASPAR yes 101977576
chr6 46740803 46740817 SPIC JASPAR yes 70375768
chr6 46740803 46740817 SPIC JASPAR yes 101977577
chr6 46740810 46740814 YY1 TRANSFAC yes 70375769
chr6 46740810 46740814 YY1 TRANSFAC yes 101977578
chr6 46740822 46740826 ESR1 TRANSFAC yes 70375770
chr6 46740822 46740826 ESR1 TRANSFAC yes 101977579
chr6 46740847 46740855 GATA3 JASPAR yes 70375771
chr6 46740847 46740855 GATA5 JASPAR yes 70375772
chr6 46740847 46740855 GATA3 JASPAR yes 101977580
chr6 46740847 46740855 GATA5 JASPAR yes 101977581
chr6 46740854 46740857 MYB TRANSFAC yes 70375773
chr6 46740854 46740857 MYB TRANSFAC yes 101977582
chr6 46740858 46740874 SOX8 JASPAR yes 70375774
chr6 46740858 46740874 SOX8 JASPAR yes 101977583
chr6 46740897 46740903 SOX10 JASPAR yes 70375775
chr6 46740897 46740903 SOX10 JASPAR yes 101977584
chr6 46740909 46740919 HOXA13 JASPAR yes 70375776
chr6 46740909 46740919 HOXA13 JASPAR yes 101977585
chr6 46740926 46740936 RELA JASPAR yes 70375777
chr6 46740926 46740936 RELA JASPAR yes 101977586
chr6 46740926 46740937 NFKB1 JASPAR yes 70375778
chr6 46740926 46740937 NFKB1 JASPAR yes 101977587
chr6 46740937 46740957 ESR1 JASPAR yes 70375779
chr6 46740937 46740957 ESR1 JASPAR yes 101977588
chr6 46740939 46740949 TFEB JASPAR yes 70375780
chr6 46740939 46740949 TFEC JASPAR yes 70375781
chr6 46740939 46740949 TFEB JASPAR yes 101977589
chr6 46740939 46740949 TFEC JASPAR yes 101977590
chr6 46740939 46740950 USF1 JASPAR yes 70375782
chr6 46740939 46740950 USF2 JASPAR yes 70375783
chr6 46740939 46740950 USF1 JASPAR yes 101977591
chr6 46740939 46740950 USF2 JASPAR yes 101977592
chr6 46740940 46740950 MAX JASPAR yes 70375784
chr6 46740940 46740950 MAX JASPAR yes 101977593
chr6 46740941 46740959 ESR2 JASPAR yes 70375785
chr6 46740941 46740959 ESR2 JASPAR yes 101977594
chr6 46740958 46740966 GATA5 JASPAR yes 70375786
chr6 46740958 46740966 GATA5 JASPAR yes 101977595
chr6 46741018 46741030 TEAD1 JASPAR yes 70375787
chr6 46741018 46741030 TEAD1 JASPAR yes 101977596
chr6 46741019 46741029 NFATC3 JASPAR yes 70375788
chr6 46741019 46741029 NFATC3 JASPAR yes 101977597
chr6 46741043 46741053 TBR1 JASPAR yes 70375789
chr6 46741043 46741053 TBR1 JASPAR yes 101977598
chr6 46741086 46741090 TEAD2 TRANSFAC yes 70375790
chr6 46741086 46741090 TEAD2 TRANSFAC yes 101977599
chr6 46741086 46741091 TBP TRANSFAC yes 70375791
chr6 46741086 46741091 TBP TRANSFAC yes 101977600
chr6 46741086 46741092 TFIID TRANSFAC yes 70375792
chr6 46741086 46741092 TFIID TRANSFAC yes 101977601
chr6 46741117 46741123 YY1 JASPAR yes 70375793
chr6 46741117 46741123 YY1 JASPAR yes 101977602
SNP sites on vista52189[chr6:46740254-46741123]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 46740255 rs190079856 C A,T
E2F7
9057236
chr6 46740323 rs150937383 A G
HNF4A HNF4G POU1F1 POU2F1 POU2F2 POU3F2 POU3F4 POU5F1B
9057237
chr6 46740377 rs186426472 G A
AR NFE2L2 SOX10
9057238
chr6 46740426 rs190002981 G C no 9057239
chr6 46740522 rs556209349 C T
YY1
9057240
chr6 46740763 rs61184992 G T
MAX ZIC1 ZIC3 ZIC4
9057241
chr6 46740904 rs3028368 AT A no 9057242
chr6 46740904 rs371637629 A AT no 9057243
chr6 46740904 rs572684205 A AT no 9057244
chr6 46740914 rs201930968 T TA,TT
HOXA13
9057245
chr6 46741013 rs140759389 G A no 9057246
chr6 46741044 rs71566590 G C
TBR1
9057247
Genes possibly regulated by vista52189[chr6:46740254-46741123]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 46655612 46672056 + TDRD6 ENSG00000180113.11 46655612 0.86 0.97 6649 15358
chr6 46671938 46703430 - PLA2G7 ENSG00000146070.12 46703430 0.89 1.0 6650 63176
chr6 46714654 46727243 + ANKRD66 ENSG00000230062.4 46714654 0.98 0.0 6651 74400
chr6 46761127 46807515 + MEP1A ENSG00000112818.5 46761127 1.0 1.0 6652 79996
Expression level of Genes
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miRNAs possibly regulated by vista52189[chr6:46740254-46741123]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results