EnhancerDB
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  3. vista52190[chr6:46765034-46765418]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52190[chr6:46765034-46765418]
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Tissue distribution of vista52190
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Transcription factor that possibly regulate vista52190[chr6:46765034-46765418]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 46765035 46765039 YY1 TRANSFAC yes 70375794
chr6 46765056 46765067 USF1 JASPAR yes 70375795
chr6 46765056 46765067 USF2 JASPAR yes 70375796
chr6 46765057 46765067 TFEB JASPAR yes 70375797
chr6 46765057 46765067 TFEC JASPAR yes 70375798
chr6 46765072 46765078 GATA1 TRANSFAC yes 70375799
chr6 46765111 46765117 SOX10 JASPAR yes 70375800
chr6 46765150 46765163 JUN JASPAR yes 70375801
chr6 46765151 46765164 ATF4 JASPAR yes 70375802
chr6 46765160 46765170 GSC2 JASPAR yes 70375803
chr6 46765160 46765170 GSC JASPAR yes 70375804
chr6 46765161 46765169 OTX1 JASPAR yes 70375805
chr6 46765161 46765169 OTX2 JASPAR yes 70375806
chr6 46765161 46765170 PITX3 JASPAR yes 70375807
chr6 46765163 46765174 CEBPA JASPAR yes 70375808
chr6 46765164 46765175 CEBPB JASPAR yes 70375809
chr6 46765173 46765176 MYB TRANSFAC yes 70375810
chr6 46765201 46765213 NHLH1 JASPAR yes 70375811
chr6 46765204 46765209 USF2 TRANSFAC yes 70375812
chr6 46765210 46765222 TAL1 JASPAR yes 70375813
chr6 46765210 46765223 ZBTB18 JASPAR yes 70375814
chr6 46765212 46765222 MYF6 JASPAR yes 70375815
chr6 46765212 46765222 NEUROG2 JASPAR yes 70375816
chr6 46765212 46765222 OLIG1 JASPAR yes 70375817
chr6 46765212 46765222 OLIG3 JASPAR yes 70375818
chr6 46765212 46765224 TAL1 JASPAR yes 70375819
chr6 46765245 46765249 NFE TRANSFAC yes 70375820
chr6 46765246 46765251 GATA2 JASPAR yes 70375821
chr6 46765262 46765276 SPIC JASPAR yes 70375822
chr6 46765275 46765284 THAP1 JASPAR yes 70375823
chr6 46765278 46765282 LFA1 TRANSFAC yes 70375824
chr6 46765309 46765323 ONECUT3 JASPAR yes 70375825
chr6 46765319 46765331 E2F8 JASPAR yes 70375826
chr6 46765336 46765342 HiNF-A TRANSFAC yes 70375827
chr6 46765345 46765349 YY1 TRANSFAC yes 70375828
SNP sites on vista52190[chr6:46765034-46765418]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 46765123 rs190401897 C T no 9057304
chr6 46765142 rs141619324 T C no 9057305
chr6 46765182 rs1410820 G A no 9057306
Genes possibly regulated by vista52190[chr6:46765034-46765418]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 46671938 46703430 - PLA2G7 ENSG00000146070.12 46703430 0.89 1.0 6650 38396
chr6 46714654 46727243 + ANKRD66 ENSG00000230062.4 46714654 0.98 0.0 6651 49620
chr6 46761127 46807515 + MEP1A ENSG00000112818.5 46761127 1.0 1.0 6652 96093
Expression level of Genes
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miRNAs possibly regulated by vista52190[chr6:46765034-46765418]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results