EnhancerDB
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  3. vista52195[chr6:47004647-47005009]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52195[chr6:47004647-47005009]
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Tissue distribution of vista52195
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Transcription factor that possibly regulate vista52195[chr6:47004647-47005009]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 47004657 47004665 HOXA5 JASPAR yes 70375913
chr6 47004657 47004665 HOXA5 JASPAR yes 101991181
chr6 47004688 47004693 ETS2 TRANSFAC yes 70375914
chr6 47004688 47004693 ETS2 TRANSFAC yes 101991182
chr6 47004703 47004720 BCL6B JASPAR yes 70375915
chr6 47004703 47004720 BCL6B JASPAR yes 101991183
chr6 47004704 47004719 STAT1 JASPAR yes 70375916
chr6 47004704 47004719 STAT1 JASPAR yes 101991184
chr6 47004706 47004717 STAT3 JASPAR yes 70375917
chr6 47004706 47004717 STAT3 JASPAR yes 101991185
chr6 47004723 47004738 HNF1A JASPAR yes 70375918
chr6 47004723 47004738 HNF1A JASPAR yes 101991186
chr6 47004725 47004739 RXRB JASPAR yes 70375919
chr6 47004725 47004739 RXRB JASPAR yes 101991187
chr6 47004726 47004729 MYB TRANSFAC yes 70375920
chr6 47004726 47004729 MYB TRANSFAC yes 101991188
chr6 47004733 47004736 MYB TRANSFAC yes 70375921
chr6 47004733 47004736 MYB TRANSFAC yes 101991189
chr6 47004742 47004756 TCF7L2 JASPAR yes 70375922
chr6 47004742 47004756 TCF7L2 JASPAR yes 101991190
chr6 47004742 47004757 LEF1 JASPAR yes 70375923
chr6 47004742 47004757 LEF1 JASPAR yes 101991191
chr6 47004742 47004763 IRF1 JASPAR yes 70375924
chr6 47004742 47004763 IRF1 JASPAR yes 101991192
chr6 47004746 47004761 PRDM1 JASPAR yes 70375925
chr6 47004746 47004761 PRDM1 JASPAR yes 101991193
chr6 47004750 47004755 ETS2 TRANSFAC yes 70375926
chr6 47004750 47004755 ETS2 TRANSFAC yes 101991194
chr6 47004763 47004776 SCRT2 JASPAR yes 70375927
chr6 47004763 47004776 SCRT2 JASPAR yes 101991195
chr6 47004790 47004800 SMAD3 JASPAR yes 70375928
chr6 47004790 47004800 SMAD3 JASPAR yes 101991196
chr6 47004795 47004815 ESR1 JASPAR yes 70375929
chr6 47004795 47004815 ESR1 JASPAR yes 101991197
chr6 47004800 47004815 ESR2 JASPAR yes 70375930
chr6 47004800 47004815 ESR2 JASPAR yes 101991198
chr6 47004806 47004824 RARA JASPAR yes 70375931
chr6 47004806 47004824 RARA JASPAR yes 101991199
chr6 47004809 47004819 RORA JASPAR yes 70375932
chr6 47004809 47004819 RORA JASPAR yes 101991200
chr6 47004809 47004823 RXRB JASPAR yes 70375933
chr6 47004809 47004823 RXRB JASPAR yes 101991201
chr6 47004809 47004824 NR2C2 JASPAR yes 70375934
chr6 47004809 47004824 NR2C2 JASPAR yes 101991202
chr6 47004817 47004820 MYB TRANSFAC yes 70375935
chr6 47004817 47004820 MYB TRANSFAC yes 101991203
chr6 47004828 47004832 YY1 TRANSFAC yes 70375936
chr6 47004828 47004832 YY1 TRANSFAC yes 101991204
chr6 47004852 47004858 HiNF-A TRANSFAC yes 70375937
chr6 47004852 47004858 HiNF-A TRANSFAC yes 101991205
chr6 47004861 47004872 CEBPB JASPAR yes 70375938
chr6 47004861 47004872 CEBPB JASPAR yes 101991206
chr6 47004861 47004874 ATF4 JASPAR yes 70375939
chr6 47004861 47004874 ATF4 JASPAR yes 101991207
chr6 47004862 47004875 JUN JASPAR yes 70375940
chr6 47004862 47004875 JUN JASPAR yes 101991208
chr6 47004873 47004877 NFE TRANSFAC yes 70375941
chr6 47004873 47004877 NFE TRANSFAC yes 101991209
chr6 47004874 47004879 GATA2 JASPAR yes 70375942
chr6 47004874 47004879 GATA2 JASPAR yes 101991210
chr6 47004875 47004881 ZNF354C JASPAR yes 70375943
chr6 47004875 47004881 ZNF354C JASPAR yes 101991211
chr6 47004882 47004887 GATA1 TRANSFAC yes 70375944
chr6 47004882 47004887 GATA1 TRANSFAC yes 101991212
chr6 47004887 47004897 HOXA13 JASPAR yes 70375945
chr6 47004887 47004897 HOXA13 JASPAR yes 101991213
chr6 47004905 47004910 GATA2 JASPAR yes 70375946
chr6 47004905 47004910 GATA2 JASPAR yes 101991214
chr6 47004924 47004938 ONECUT3 JASPAR yes 70375947
chr6 47004924 47004938 ONECUT3 JASPAR yes 101991215
chr6 47004925 47004943 IRF2 JASPAR yes 70375948
chr6 47004925 47004943 IRF2 JASPAR yes 101991216
chr6 47004925 47004946 IRF1 JASPAR yes 70375949
chr6 47004925 47004946 IRF1 JASPAR yes 101991217
chr6 47004927 47004936 SRY JASPAR yes 70375950
chr6 47004927 47004936 SRY JASPAR yes 101991218
chr6 47004927 47004942 STAT2 JASPAR yes 70375951
chr6 47004927 47004942 STAT2 JASPAR yes 101991219
chr6 47004952 47004956 NFE TRANSFAC yes 70375952
chr6 47004952 47004956 NFE TRANSFAC yes 101991220
chr6 47004969 47004973 YY1 TRANSFAC yes 70375953
chr6 47004969 47004973 YY1 TRANSFAC yes 101991221
chr6 47004974 47004986 INSM1 JASPAR yes 70375954
chr6 47004974 47004986 INSM1 JASPAR yes 101991222
chr6 47004992 47004996 YY1 TRANSFAC yes 70375955
chr6 47004992 47004996 YY1 TRANSFAC yes 101991223
chr6 47004998 47005002 YY1 TRANSFAC yes 70375956
chr6 47004998 47005002 YY1 TRANSFAC yes 101991224
chr6 47005002 47005012 NFATC3 JASPAR yes 70375957
chr6 47005002 47005012 NFATC3 JASPAR yes 101991225
chr6 47005003 47005010 NFATC2 JASPAR yes 70375958
chr6 47005003 47005010 NFATC2 JASPAR yes 101991226
SNP sites on vista52195[chr6:47004647-47005009]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 47004905 rs76352329 T A,C
GATA2
9058708
chr6 47004951 rs115398663 G C no 9058709
chr6 47004983 rs77130099 G A
INSM1
9058710
Genes possibly regulated by vista52195[chr6:47004647-47005009]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 46820249 46922680 - GPR116 ENSG00000069122.14 46922680 0.94 1.0 6653 18033
chr6 46965440 47010099 - GPR110 ENSG00000153292.11 47010099 0.96 1.0 6654 94910
Expression level of Genes
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miRNAs possibly regulated by vista52195[chr6:47004647-47005009]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results