EnhancerDB
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  3. vista52209[chr6:47550559-47550935]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52209[chr6:47550559-47550935]
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Tissue distribution of vista52209
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Transcription factor that possibly regulate vista52209[chr6:47550559-47550935]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 47550573 47550582 NF-IL6 TRANSFAC yes 70376452
chr6 47550574 47550584 CEBPB JASPAR yes 70376453
chr6 47550574 47550584 CEBPD JASPAR yes 70376454
chr6 47550574 47550584 CEBPE JASPAR yes 70376455
chr6 47550574 47550584 CEBPG JASPAR yes 70376456
chr6 47550574 47550585 CEBPB JASPAR yes 70376457
chr6 47550599 47550608 SP1 TRANSFAC yes 70376458
chr6 47550600 47550608 SP1 TRANSFAC yes 70376459
chr6 47550600 47550610 SP1 JASPAR yes 70376460
chr6 47550609 47550623 TLX1 JASPAR yes 70376461
chr6 47550621 47550642 ZNF263 JASPAR yes 70376462
chr6 47550670 47550680 SP1 JASPAR yes 70376463
chr6 47550670 47550689 PAX5 JASPAR yes 70376464
chr6 47550673 47550678 SP1 TRANSFAC yes 70376465
chr6 47550692 47550696 YY1 TRANSFAC yes 70376466
chr6 47550703 47550713 SP1 JASPAR yes 70376467
chr6 47550704 47550714 SP1 JASPAR yes 70376468
chr6 47550705 47550710 SP1 TRANSFAC yes 70376469
chr6 47550706 47550711 SP1 TRANSFAC yes 70376470
chr6 47550706 47550712 SP1 TRANSFAC yes 70376471
chr6 47550708 47550721 NFKB1 JASPAR yes 70376472
chr6 47550708 47550721 NFKB2 JASPAR yes 70376473
chr6 47550711 47550722 CEBPB JASPAR yes 70376474
chr6 47550735 47550754 PAX5 JASPAR yes 70376475
chr6 47550740 47550751 NRL JASPAR yes 70376476
chr6 47550740 47550755 MAFK JASPAR yes 70376477
chr6 47550747 47550764 RXRA JASPAR yes 70376478
chr6 47550757 47550763 ZNF354C JASPAR yes 70376479
chr6 47550764 47550778 SPI1 JASPAR yes 70376480
chr6 47550769 47550788 REST JASPAR yes 70376481
chr6 47550783 47550802 PITX2 TRANSFAC yes 70376482
chr6 47550789 47550802 ZBTB18 JASPAR yes 70376483
chr6 47550790 47550802 PKNOX1 JASPAR yes 70376484
chr6 47550790 47550802 TGIF1 JASPAR yes 70376485
chr6 47550791 47550800 SNAI2 JASPAR yes 70376486
chr6 47550791 47550801 FIGLA JASPAR yes 70376487
chr6 47550791 47550801 ID4 JASPAR yes 70376488
chr6 47550791 47550801 TCF3 JASPAR yes 70376489
chr6 47550791 47550801 TCF4 JASPAR yes 70376490
chr6 47550793 47550802 ZEB1 JASPAR yes 70376491
chr6 47550793 47550803 TBX21 JASPAR yes 70376492
chr6 47550794 47550802 MGA JASPAR yes 70376493
chr6 47550794 47550802 TBX15 JASPAR yes 70376494
chr6 47550794 47550802 TBX1 JASPAR yes 70376495
chr6 47550794 47550802 TBX4 JASPAR yes 70376496
chr6 47550794 47550802 TBX5 JASPAR yes 70376497
chr6 47550794 47550804 TBR1 JASPAR yes 70376498
chr6 47550794 47550807 SMAD2 JASPAR yes 70376499
chr6 47550807 47550822 TP53 JASPAR yes 70376500
chr6 47550817 47550832 STAT2 JASPAR yes 70376501
chr6 47550818 47550832 STAT1 JASPAR yes 70376502
chr6 47550819 47550834 IRF9 JASPAR yes 70376503
chr6 47550824 47550828 YY1 TRANSFAC yes 70376504
chr6 47550853 47550867 NR2F1 JASPAR yes 70376505
chr6 47550883 47550898 HNF4G JASPAR yes 70376506
chr6 47550884 47550899 HNF4A JASPAR yes 70376507
chr6 47550902 47550915 ELF1 JASPAR yes 70376508
chr6 47550903 47550910 SPI1 JASPAR yes 70376509
chr6 47550903 47550911 FEV JASPAR yes 70376510
chr6 47550905 47550910 ETS2 TRANSFAC yes 70376511
SNP sites on vista52209[chr6:47550559-47550935]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 47550681 rs528549240 G A
PAX5
9063213
chr6 47550809 rs140062848 G A
TP53
9063214
chr6 47550843 rs118161770 G T no 9063215
Genes possibly regulated by vista52209[chr6:47550559-47550935]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 47624172 47665533 + GPR111 ENSG00000164393.4 47624172 0.88 1.0 6657 26763
Expression level of Genes
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miRNAs possibly regulated by vista52209[chr6:47550559-47550935]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results