EnhancerDB
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  3. vista52214[chr6:48005638-48005954]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52214[chr6:48005638-48005954]
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Tissue distribution of vista52214
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Transcription factor that possibly regulate vista52214[chr6:48005638-48005954]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 48005629 48005650 IRF1 JASPAR yes 70376574
chr6 48005629 48005650 IRF1 JASPAR yes 102055395
chr6 48005632 48005642 MEF2A JASPAR yes 70376575
chr6 48005632 48005642 MEF2A JASPAR yes 102055396
chr6 48005633 48005648 FOXP1 JASPAR yes 70376576
chr6 48005633 48005648 FOXP1 JASPAR yes 102055397
chr6 48005635 48005650 FOXP1 JASPAR yes 70376577
chr6 48005635 48005650 FOXP1 JASPAR yes 102055398
chr6 48005635 48005656 IRF1 JASPAR yes 70376578
chr6 48005635 48005656 IRF1 JASPAR yes 102055399
chr6 48005636 48005657 IRF1 JASPAR yes 70376579
chr6 48005636 48005657 IRF1 JASPAR yes 102055400
chr6 48005637 48005652 FOXP1 JASPAR yes 70376580
chr6 48005637 48005652 FOXP1 JASPAR yes 102055401
chr6 48005638 48005653 FOXP1 JASPAR yes 70376581
chr6 48005638 48005653 FOXP1 JASPAR yes 102055402
chr6 48005639 48005645 TBP TRANSFAC yes 70376582
chr6 48005639 48005645 TBP TRANSFAC yes 102055403
chr6 48005639 48005654 FOXP1 JASPAR yes 70376583
chr6 48005639 48005654 FOXP1 JASPAR yes 102055404
chr6 48005640 48005655 FOXP1 JASPAR yes 70376584
chr6 48005640 48005655 FOXP1 JASPAR yes 102055405
chr6 48005641 48005656 FOXP1 JASPAR yes 70376585
chr6 48005641 48005656 FOXP1 JASPAR yes 102055406
chr6 48005641 48005662 IRF1 JASPAR yes 70376586
chr6 48005641 48005662 IRF1 JASPAR yes 102055407
chr6 48005642 48005657 FOXP1 JASPAR yes 70376587
chr6 48005642 48005657 FOXP1 JASPAR yes 102055408
chr6 48005645 48005660 PRDM1 JASPAR yes 70376588
chr6 48005645 48005660 STAT2 JASPAR yes 70376589
chr6 48005645 48005660 PRDM1 JASPAR yes 102055409
chr6 48005645 48005660 STAT2 JASPAR yes 102055410
chr6 48005645 48005663 NR3C1 JASPAR yes 70376590
chr6 48005645 48005663 NR3C1 JASPAR yes 102055411
chr6 48005654 48005668 SPI1 JASPAR yes 70376591
chr6 48005654 48005668 SPI1 JASPAR yes 102055412
chr6 48005657 48005662 ETS2 TRANSFAC yes 70376592
chr6 48005657 48005662 ETS2 TRANSFAC yes 102055413
chr6 48005661 48005673 FOXI1 JASPAR yes 70376593
chr6 48005661 48005673 FOXI1 JASPAR yes 102055414
chr6 48005664 48005668 YY1 TRANSFAC yes 70376594
chr6 48005664 48005668 YY1 TRANSFAC yes 102055415
chr6 48005674 48005694 RREB1 JASPAR yes 70376595
chr6 48005674 48005694 RREB1 JASPAR yes 102055416
chr6 48005679 48005699 RREB1 JASPAR yes 70376596
chr6 48005679 48005699 RREB1 JASPAR yes 102055417
chr6 48005686 48005701 FOXP1 JASPAR yes 70376597
chr6 48005686 48005701 FOXP1 JASPAR yes 102055418
chr6 48005691 48005697 TCF4 TRANSFAC yes 70376598
chr6 48005691 48005697 TCF4 TRANSFAC yes 102055419
chr6 48005691 48005706 FOXP1 JASPAR yes 70376599
chr6 48005691 48005706 FOXP1 JASPAR yes 102055420
chr6 48005692 48005703 FOXP2 JASPAR yes 70376600
chr6 48005692 48005703 FOXP2 JASPAR yes 102055421
chr6 48005692 48005704 FOXC2 JASPAR yes 70376601
chr6 48005692 48005704 FOXC2 JASPAR yes 102055422
chr6 48005692 48005706 FOXF2 JASPAR yes 70376602
chr6 48005692 48005706 FOXF2 JASPAR yes 102055423
chr6 48005693 48005701 FOXG1 JASPAR yes 70376603
chr6 48005693 48005701 FOXO3 JASPAR yes 70376604
chr6 48005693 48005701 FOXG1 JASPAR yes 102055424
chr6 48005693 48005701 FOXO3 JASPAR yes 102055425
chr6 48005693 48005704 FOXC1 JASPAR yes 70376605
chr6 48005693 48005704 FOXC1 JASPAR yes 102055426
chr6 48005695 48005703 GATA3 JASPAR yes 70376606
chr6 48005695 48005703 GATA3 JASPAR yes 102055427
chr6 48005701 48005707 LEF1 TRANSFAC yes 70376607
chr6 48005701 48005707 SOX10 JASPAR yes 70376608
chr6 48005701 48005707 LEF1 TRANSFAC yes 102055428
chr6 48005701 48005707 SOX10 JASPAR yes 102055429
chr6 48005706 48005721 FOXP1 JASPAR yes 70376609
chr6 48005706 48005721 FOXP1 JASPAR yes 102055430
chr6 48005707 48005721 GATA2 JASPAR yes 70376610
chr6 48005707 48005721 GATA2 JASPAR yes 102055431
chr6 48005709 48005717 GATA3 JASPAR yes 70376611
chr6 48005709 48005717 GATA3 JASPAR yes 102055432
chr6 48005712 48005718 TBP TRANSFAC yes 70376612
chr6 48005712 48005718 TBP TRANSFAC yes 102055433
chr6 48005776 48005797 IRF1 JASPAR yes 70376613
chr6 48005776 48005797 IRF1 JASPAR yes 102055434
chr6 48005777 48005791 IRF7 JASPAR yes 70376614
chr6 48005777 48005791 IRF7 JASPAR yes 102055435
chr6 48005780 48005795 PRDM1 JASPAR yes 70376615
chr6 48005780 48005795 PRDM1 JASPAR yes 102055436
chr6 48005782 48005797 FOXP1 JASPAR yes 70376616
chr6 48005782 48005797 FOXP1 JASPAR yes 102055437
chr6 48005789 48005810 IRF1 JASPAR yes 70376617
chr6 48005789 48005810 IRF1 JASPAR yes 102055438
chr6 48005807 48005814 NKX3-1 JASPAR yes 70376618
chr6 48005807 48005814 NKX3-1 JASPAR yes 102055439
chr6 48005808 48005826 IRF2 JASPAR yes 70376619
chr6 48005808 48005826 IRF2 JASPAR yes 102055440
chr6 48005809 48005830 IRF1 JASPAR yes 70376620
chr6 48005809 48005830 IRF1 JASPAR yes 102055441
chr6 48005811 48005826 STAT2 JASPAR yes 70376621
chr6 48005811 48005826 STAT2 JASPAR yes 102055442
chr6 48005812 48005826 STAT1 JASPAR yes 70376622
chr6 48005812 48005826 STAT1 JASPAR yes 102055443
chr6 48005813 48005827 IRF7 JASPAR yes 70376623
chr6 48005813 48005827 IRF8 JASPAR yes 70376624
chr6 48005813 48005827 IRF7 JASPAR yes 102055444
chr6 48005813 48005827 IRF8 JASPAR yes 102055445
chr6 48005813 48005828 IRF9 JASPAR yes 70376625
chr6 48005813 48005828 IRF9 JASPAR yes 102055446
chr6 48005816 48005837 IRF1 JASPAR yes 70376626
chr6 48005816 48005837 IRF1 JASPAR yes 102055447
chr6 48005817 48005832 STAT2 JASPAR yes 70376627
chr6 48005817 48005832 STAT2 JASPAR yes 102055448
chr6 48005819 48005830 ETV2 JASPAR yes 70376628
chr6 48005819 48005830 ETV2 JASPAR yes 102055449
chr6 48005819 48005833 SPIC JASPAR yes 70376629
chr6 48005819 48005833 SPIC JASPAR yes 102055450
chr6 48005822 48005829 SPIB JASPAR yes 70376630
chr6 48005822 48005829 SPIB JASPAR yes 102055451
chr6 48005841 48005851 MZF1 JASPAR yes 70376631
chr6 48005841 48005851 MZF1 JASPAR yes 102055452
chr6 48005848 48005851 MYB TRANSFAC yes 70376632
chr6 48005848 48005851 MYB TRANSFAC yes 102055453
chr6 48005852 48005873 IRF1 JASPAR yes 70376633
chr6 48005852 48005873 IRF1 JASPAR yes 102055454
chr6 48005856 48005871 STAT2 JASPAR yes 70376634
chr6 48005856 48005871 STAT2 JASPAR yes 102055455
chr6 48005858 48005879 IRF1 JASPAR yes 70376635
chr6 48005858 48005879 IRF1 JASPAR yes 102055456
chr6 48005860 48005875 IRF9 JASPAR yes 70376636
chr6 48005860 48005875 IRF9 JASPAR yes 102055457
chr6 48005861 48005866 ETS2 TRANSFAC yes 70376637
chr6 48005861 48005866 ETS2 TRANSFAC yes 102055458
chr6 48005862 48005876 STAT1 JASPAR yes 70376638
chr6 48005862 48005876 STAT1 JASPAR yes 102055459
chr6 48005862 48005877 PRDM1 JASPAR yes 70376639
chr6 48005862 48005877 STAT2 JASPAR yes 70376640
chr6 48005862 48005877 PRDM1 JASPAR yes 102055460
chr6 48005862 48005877 STAT2 JASPAR yes 102055461
chr6 48005863 48005875 IRF1 JASPAR yes 70376641
chr6 48005863 48005875 IRF1 JASPAR yes 102055462
chr6 48005866 48005871 MYB TRANSFAC yes 70376642
chr6 48005866 48005871 MYB TRANSFAC yes 102055463
chr6 48005870 48005884 SPIC JASPAR yes 70376643
chr6 48005870 48005884 SPIC JASPAR yes 102055464
chr6 48005874 48005895 ZNF263 JASPAR yes 70376644
chr6 48005874 48005895 ZNF263 JASPAR yes 102055465
chr6 48005875 48005883 EHF JASPAR yes 70376645
chr6 48005875 48005883 EHF JASPAR yes 102055466
chr6 48005878 48005899 ZNF263 JASPAR yes 70376646
chr6 48005878 48005899 ZNF263 JASPAR yes 102055467
chr6 48005879 48005884 ETS2 TRANSFAC yes 70376647
chr6 48005879 48005884 ETS2 TRANSFAC yes 102055468
chr6 48005895 48005903 FOXO3 JASPAR yes 70376648
chr6 48005895 48005903 FOXO3 JASPAR yes 102055469
chr6 48005899 48005915 SOX8 JASPAR yes 70376649
chr6 48005899 48005915 SOX8 JASPAR yes 102055470
chr6 48005911 48005922 DUX4 JASPAR yes 70376650
chr6 48005911 48005922 DUX4 JASPAR yes 102055471
chr6 48005919 48005936 PAX9 JASPAR yes 70376651
chr6 48005919 48005936 PAX9 JASPAR yes 102055472
chr6 48005925 48005930 GATA2 JASPAR yes 70376652
chr6 48005925 48005930 GATA2 JASPAR yes 102055473
chr6 48005945 48005956 HOXA10 JASPAR yes 70376653
chr6 48005945 48005956 HOXA10 JASPAR yes 102055474
chr6 48005946 48005956 EMX1 JASPAR yes 70376654
chr6 48005946 48005956 EMX2 JASPAR yes 70376655
chr6 48005946 48005956 EVX1 JASPAR yes 70376656
chr6 48005946 48005956 EVX2 JASPAR yes 70376657
chr6 48005946 48005956 GBX1 JASPAR yes 70376658
chr6 48005946 48005956 GBX2 JASPAR yes 70376659
chr6 48005946 48005956 GSX2 JASPAR yes 70376660
chr6 48005946 48005956 HESX1 JASPAR yes 70376661
chr6 48005946 48005956 HOXA2 JASPAR yes 70376662
chr6 48005946 48005956 HOXB2 JASPAR yes 70376663
chr6 48005946 48005956 HOXB3 JASPAR yes 70376664
chr6 48005946 48005956 LHX2 JASPAR yes 70376665
chr6 48005946 48005956 LHX6 JASPAR yes 70376666
chr6 48005946 48005956 MEOX1 JASPAR yes 70376667
chr6 48005946 48005956 MEOX2 JASPAR yes 70376668
chr6 48005946 48005956 MIXL1 JASPAR yes 70376669
chr6 48005946 48005956 MNX1 JASPAR yes 70376670
chr6 48005946 48005956 NOTO JASPAR yes 70376671
chr6 48005946 48005956 RAX JASPAR yes 70376672
chr6 48005946 48005956 EMX1 JASPAR yes 102055475
chr6 48005946 48005956 EMX2 JASPAR yes 102055476
chr6 48005946 48005956 EVX1 JASPAR yes 102055477
chr6 48005946 48005956 EVX2 JASPAR yes 102055478
chr6 48005946 48005956 GBX1 JASPAR yes 102055479
chr6 48005946 48005956 GBX2 JASPAR yes 102055480
chr6 48005946 48005956 GSX2 JASPAR yes 102055481
chr6 48005946 48005956 HESX1 JASPAR yes 102055482
chr6 48005946 48005956 HOXA2 JASPAR yes 102055483
chr6 48005946 48005956 HOXB2 JASPAR yes 102055484
chr6 48005946 48005956 HOXB3 JASPAR yes 102055485
chr6 48005946 48005956 LHX2 JASPAR yes 102055486
chr6 48005946 48005956 LHX6 JASPAR yes 102055487
chr6 48005946 48005956 MEOX1 JASPAR yes 102055488
chr6 48005946 48005956 MEOX2 JASPAR yes 102055489
chr6 48005946 48005956 MIXL1 JASPAR yes 102055490
chr6 48005946 48005956 MNX1 JASPAR yes 102055491
chr6 48005946 48005956 NOTO JASPAR yes 102055492
chr6 48005946 48005956 RAX JASPAR yes 102055493
chr6 48005947 48005955 LMX1A JASPAR yes 70376673
chr6 48005947 48005955 LMX1B JASPAR yes 70376674
chr6 48005947 48005955 NKX6-1 JASPAR yes 70376675
chr6 48005947 48005955 NKX6-2 JASPAR yes 70376676
chr6 48005947 48005955 PDX1 JASPAR yes 70376677
chr6 48005947 48005955 VAX1 JASPAR yes 70376678
chr6 48005947 48005955 VAX2 JASPAR yes 70376679
chr6 48005947 48005955 VSX1 JASPAR yes 70376680
chr6 48005947 48005955 LMX1A JASPAR yes 102055494
chr6 48005947 48005955 LMX1B JASPAR yes 102055495
chr6 48005947 48005955 NKX6-1 JASPAR yes 102055496
chr6 48005947 48005955 NKX6-2 JASPAR yes 102055497
chr6 48005947 48005955 PDX1 JASPAR yes 102055498
chr6 48005947 48005955 VAX1 JASPAR yes 102055499
chr6 48005947 48005955 VAX2 JASPAR yes 102055500
chr6 48005947 48005955 VSX1 JASPAR yes 102055501
chr6 48005952 48005966 ZIC1 JASPAR yes 70376681
chr6 48005952 48005966 ZIC1 JASPAR yes 102055502
chr6 48005952 48005967 ZIC3 JASPAR yes 70376682
chr6 48005952 48005967 ZIC4 JASPAR yes 70376683
chr6 48005952 48005967 ZIC3 JASPAR yes 102055503
chr6 48005952 48005967 ZIC4 JASPAR yes 102055504
SNP sites on vista52214[chr6:48005638-48005954]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 48005654 rs11434281 A AT
FOXP1 IRF1 NR3C1 PRDM1 SPI1 STAT2
9064768
chr6 48005672 rs548904510 T A
FOXI1
9064769
chr6 48005713 rs548302847 T TA
FOXP1 GATA2 GATA3 TBP
9064770
chr6 48005755 rs115250669 A G no 9064771
chr6 48005779 rs116827247 C T
IRF1 IRF7
9064772
chr6 48005879 rs12205869 G A
EHF ETS2 IRF1 SPIC ZNF263
9064773
chr6 48005940 rs138515654 G GA no 9064774
chr6 48005943 rs565217333 C T no 9064775
Genes possibly regulated by vista52214[chr6:48005638-48005954]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 47845764 48036425 - PTCHD4 ENSG00000244694.3 48036425 0.86 0.93 6660 69529
Expression level of Genes
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miRNAs possibly regulated by vista52214[chr6:48005638-48005954]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results