EnhancerDB
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  3. vista52215[chr6:48013349-48013528]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52215[chr6:48013349-48013528]
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Tissue distribution of vista52215
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Transcription factor that possibly regulate vista52215[chr6:48013349-48013528]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 48013370 48013375 GATA2 JASPAR yes 70376684
chr6 48013372 48013383 FLI1 JASPAR yes 70376685
chr6 48013373 48013377 YY1 TRANSFAC yes 70376686
chr6 48013373 48013383 ERF JASPAR yes 70376687
chr6 48013373 48013383 ERG JASPAR yes 70376688
chr6 48013373 48013383 ETS1 JASPAR yes 70376689
chr6 48013373 48013383 FEV JASPAR yes 70376690
chr6 48013373 48013383 FLI1 JASPAR yes 70376691
chr6 48013373 48013384 ETV2 JASPAR yes 70376692
chr6 48013373 48013388 STAT1 JASPAR yes 70376693
chr6 48013374 48013382 FEV JASPAR yes 70376694
chr6 48013375 48013386 STAT1 JASPAR yes 70376695
chr6 48013380 48013390 EVX1 JASPAR yes 70376696
chr6 48013380 48013390 MEOX1 JASPAR yes 70376697
chr6 48013380 48013390 MEOX2 JASPAR yes 70376698
chr6 48013386 48013391 GATA2 JASPAR yes 70376699
chr6 48013388 48013394 MZF1 JASPAR yes 70376700
chr6 48013392 48013396 YY1 TRANSFAC yes 70376701
chr6 48013419 48013433 GATA2 JASPAR yes 70376702
chr6 48013421 48013428 GATA3 TRANSFAC yes 70376703
chr6 48013421 48013429 GATA5 JASPAR yes 70376704
chr6 48013424 48013427 MYB TRANSFAC yes 70376705
chr6 48013425 48013441 POU4F2 JASPAR yes 70376706
chr6 48013425 48013441 POU4F3 JASPAR yes 70376707
chr6 48013427 48013441 POU4F1 JASPAR yes 70376708
chr6 48013428 48013438 BARHL2 JASPAR yes 70376709
chr6 48013430 48013434 YY1 TRANSFAC yes 70376710
chr6 48013448 48013459 CDX2 JASPAR yes 70376711
chr6 48013452 48013456 TEAD2 TRANSFAC yes 70376712
chr6 48013452 48013457 TBP TRANSFAC yes 70376713
chr6 48013459 48013462 MYB TRANSFAC yes 70376714
chr6 48013459 48013475 SOX4 JASPAR yes 70376715
chr6 48013462 48013480 ESR2 JASPAR yes 70376716
chr6 48013498 48013519 IRF1 JASPAR yes 70376717
chr6 48013502 48013523 IRF1 JASPAR yes 70376718
chr6 48013503 48013518 FOXP1 JASPAR yes 70376719
chr6 48013503 48013524 IRF1 JASPAR yes 70376720
chr6 48013504 48013519 FOXP1 JASPAR yes 70376721
chr6 48013504 48013525 IRF1 JASPAR yes 70376722
chr6 48013509 48013524 FOXP1 JASPAR yes 70376723
chr6 48013511 48013526 FOXP1 JASPAR yes 70376724
chr6 48013513 48013528 FOXP1 JASPAR yes 70376725
SNP sites on vista52215[chr6:48013349-48013528]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 48013368 rs114316386 A G no 9064784
chr6 48013451 rs332581 G A,T
CDX2
9064785
chr6 48013481 rs144652588 C T no 9064786
Genes possibly regulated by vista52215[chr6:48013349-48013528]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 47845764 48036425 - PTCHD4 ENSG00000244694.3 48036425 0.86 0.93 6660 77103
Expression level of Genes
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miRNAs possibly regulated by vista52215[chr6:48013349-48013528]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results