EnhancerDB
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  3. vista5242[chr1:222439708-222439874]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5242[chr1:222439708-222439874]
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Tissue distribution of vista5242
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Transcription factor that possibly regulate vista5242[chr1:222439708-222439874]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 222439760 222439773 JUN JASPAR yes 35603099
chr1 222439760 222439773 JUN JASPAR yes 118465705
chr1 222439761 222439775 ATF7 JASPAR yes 35603100
chr1 222439761 222439775 ATF7 JASPAR yes 118465706
chr1 222439762 222439774 JDP2 JASPAR yes 35603101
chr1 222439762 222439774 JDP2 JASPAR yes 118465707
chr1 222439773 222439778 TFAP2A TRANSFAC yes 35603102
chr1 222439773 222439778 TFAP2A TRANSFAC yes 118465708
chr1 222439773 222439779 MZF1 JASPAR yes 35603103
chr1 222439773 222439779 MZF1 JASPAR yes 118465709
chr1 222439775 222439790 AR JASPAR yes 35603104
chr1 222439775 222439790 AR JASPAR yes 118465710
chr1 222439790 222439809 RFX2 JASPAR yes 35603105
chr1 222439790 222439809 RFX2 JASPAR yes 118465711
chr1 222439817 222439825 HOXA5 JASPAR yes 35603106
chr1 222439817 222439825 HOXA5 JASPAR yes 118465712
chr1 222439830 222439841 E2F6 JASPAR yes 35603107
chr1 222439830 222439841 E2F6 JASPAR yes 118465713
chr1 222439834 222439845 E2F6 JASPAR yes 35603108
chr1 222439834 222439845 E2F6 JASPAR yes 118465714
chr1 222439846 222439867 MAFG JASPAR yes 35603109
chr1 222439846 222439867 MAFG JASPAR yes 118465715
chr1 222439851 222439869 MAFF JASPAR yes 35603110
chr1 222439851 222439869 MAFF JASPAR yes 118465716
chr1 222439859 222439869 CLOCK JASPAR yes 35603111
chr1 222439859 222439869 MAX JASPAR yes 35603112
chr1 222439859 222439869 MNT JASPAR yes 35603113
chr1 222439859 222439869 CLOCK JASPAR yes 118465717
chr1 222439859 222439869 MAX JASPAR yes 118465718
chr1 222439859 222439869 MNT JASPAR yes 118465719
chr1 222439861 222439866 MYC TRANSFAC yes 35603114
chr1 222439861 222439866 USF1 TRANSFAC yes 35603115
chr1 222439861 222439866 USF2 TRANSFAC yes 35603116
chr1 222439861 222439866 MYC TRANSFAC yes 118465720
chr1 222439861 222439866 USF1 TRANSFAC yes 118465721
chr1 222439861 222439866 USF2 TRANSFAC yes 118465722
chr1 222439861 222439868 USF1 JASPAR yes 35603117
chr1 222439861 222439868 USF1 JASPAR yes 118465723
chr1 222439869 222439875 PEA3 TRANSFAC yes 35603118
chr1 222439869 222439875 PEA3 TRANSFAC yes 118465724
SNP sites on vista5242[chr1:222439708-222439874]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 222439768 rs142746798 C T
ATF7 JDP2 JUN
971405
chr1 222439774 rs73121242 T G
ATF7 JDP2 MZF1 TFAP2A
971406
chr1 222439814 rs10677747 T TAA no 971407
chr1 222439814 rs386369730 T TAA no 971408
Genes possibly regulated by vista5242[chr1:222439708-222439874]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5242[chr1:222439708-222439874]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results